Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4241481	4241505	25	2 [1]	[0] 3	BW25113_RS20970	SopA family protein

CAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGATGGTTATATCAATAACATTATAAAAATGATTGATAC  >  NZ_CP009273/4241391‑4241484                                                                                          |     cAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGATGGTTATATCAATAACATTATAAAAAtgattg      <  1:103688/90‑1 (MQ=255)     aCAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGATGGTTATATCAATAACATTATAAAAATGATTGATAc  <  2:445491/90‑1 (MQ=255)                                                                                          |     CAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGATGGTTATATCAATAACATTATAAAAATGATTGATAC  >  NZ_CP009273/4241391‑4241484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑