| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 259,276 | A→G | G35G (GGT→GGC) | ykfI ← | type IV toxin‑antitoxin system toxin YkfI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 259,276 | 0 | A | G | 100.0% | 87.2 / NA | 25 | G35G (GGT→GGC) | ykfI | type IV toxin‑antitoxin system toxin YkfI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (13/12); total (13/12) | |||||||||||
TCACGGCATCGGCTAGGGTGATACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGACCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGACAGGCAGGGCTTCACCG > NZ_CP009273/259191‑259349 | tCACGGCATCGGCTAGGGTGATACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCAt < 2:606951/90‑1 (MQ=255)tCACGGCATCGGCTAGGGTGATACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCAt < 2:277570/90‑1 (MQ=255) gCATCGGCTAGGGTGATACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGc < 1:16394/90‑1 (MQ=255) tGATACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGAc < 2:136346/90‑1 (MQ=255) aTACCGGCATCGATGTGTTCTTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACgt > 1:290142/1‑90 (MQ=255) aTACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACgt > 1:542584/1‑90 (MQ=255) ggCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAg > 2:79796/1‑90 (MQ=255) cGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACa < 2:301631/90‑1 (MQ=255) tgtTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGc > 1:5753/1‑90 (MQ=255) gtTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACgt < 1:408890/74‑1 (MQ=255) gtTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACgt > 2:408890/1‑74 (MQ=255) ccTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGa > 1:229967/1‑90 (MQ=255) cTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGAc < 2:5753/90‑1 (MQ=255) cacaGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCAc > 2:111567/1‑90 (MQ=255) acaGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACg < 1:69/90‑1 (MQ=255) cATTGCAGAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGAca > 1:72989/1‑90 (MQ=255) gAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACgtg > 1:418925/1‑50 (MQ=255) gAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACgtg < 2:418925/50‑1 (MQ=255) gAATGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGACAGGCAggg > 1:309379/1‑90 (MQ=255) aTGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGAcaggc < 1:111152/84‑1 (MQ=255) aTGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGAcaggc > 2:111152/1‑84 (MQ=255) aTGGCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGACAGGCAGGGCt > 2:587013/1‑90 (MQ=255) gCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCcag > 2:293637/1‑37 (MQ=17) gCGTGTCGTTTATTGTCAGGCCATAGTGCTGTTCcag < 1:293637/37‑1 (MQ=18) tgtCGTTTATTGTCAGGCCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGACAGGCAGGGCTTCAccg < 2:309379/90‑1 (MQ=255) | TCACGGCATCGGCTAGGGTGATACCGGCATCGATGTGTTCCTTAATCACAGCCTCATTGCAGAATGGCGTGTCGTTTATTGTCAGACCATAGTGCTGTTCCAGCAGACGTGTCAGTAACATTTGCCAGACAGCCACGGGTGACAGGCAGGGCTTCACCG > NZ_CP009273/259191‑259349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |