| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,562,985 | A→C | P32P (CCT→CCG) | digH ← | glycoside hydrolase family 10 protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,562,985 | 0 | A | C | 100.0% | 52.7 / NA | 16 | P32P (CCT→CCG) | digH | glycoside hydrolase family 10 protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (7/9); total (7/9) | |||||||||||
ATGCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCA > NZ_CP009273/1562905‑1563071 | aTGCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCtt < 2:238717/90‑1 (MQ=255) gCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCtttt < 1:124594/90‑1 (MQ=255) gCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCtttt < 1:376417/90‑1 (MQ=255) gCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCtttt < 2:220697/90‑1 (MQ=255) gCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCtttt < 2:445599/90‑1 (MQ=255) tCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCTTTTACAACTac < 1:109093/90‑1 (MQ=255) ttgttgCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGc > 2:19041/1‑90 (MQ=255) gCGTCGTGGCTGGTGGCTTTTAACCTGTTTGTAGTGTTACCATGGCCTCTATCGGTGTGCTTTTACAACTACTCAATAAAAGTGCCAGTg < 1:569139/90‑1 (MQ=255) gtGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACt > 2:15061/1‑90 (MQ=255) gctgGTGGTGTCACCATGGACTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATc > 2:56175/1‑90 (MQ=255) tCACCATGGACTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCt > 2:61802/1‑90 (MQ=255) tGGACTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTc > 2:187064/1‑90 (MQ=255) tGGACTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTc > 2:78444/1‑90 (MQ=255) aCTCTGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCggg < 1:242517/90‑1 (MQ=255) tGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCa > 2:217944/1‑90 (MQ=255) tGGCGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCa < 2:358128/90‑1 (MQ=255) | ATGCCACGCATCGGTTGTGACGATTGTTGCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCA > NZ_CP009273/1562905‑1563071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |