Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3644771	3646531–3645398	628–1761	3 [2]	[2] 3	[BW25113_RS18155]–BW25113_RS18160	[BW25113_RS18155],BW25113_RS18160

AATACATATCACGGCGATATTTATAACTGCACAACAAATACCGATAATGCTAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTGGGAAGAACAACAACCCATTAATTCCACATTCTCTGGAGAAGGATATATCTCTGA  >  NZ_CP009273/3644681‑3644823                                                                                          |                                                      aataCATATCACGGCGATATTTATAACTGCACAACAAATACCGATAATGCTAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTgg                                                       >  1:306773/1‑90 (MQ=255)      atatCACGGCGATATTTATAACTGCACAACAAATACCGATAATGCTAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTGGgaaga                                                  >  1:285863/1‑90 (MQ=255)                                                      aaCGCCAGACACACCGAAGTGGCCTTGCGATAATTGGGAAGAACAACAACCCATTAATTCCACATTCTCTGGAGAAGGATATATCTCTGa  <  2:285863/90‑1 (MQ=255)                                                                                          |                                                      AATACATATCACGGCGATATTTATAACTGCACAACAAATACCGATAATGCTAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTGGGAAGAACAACAACCCATTAATTCCACATTCTCTGGAGAAGGATATATCTCTGA  >  NZ_CP009273/3644681‑3644823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑