Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1116572	1116606	35	5 [3]	[3] 4	bssS/dinI	biofilm formation regulator BssS/DNA damage‑inducible protein I

CATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGG‑CGACCCGGCAAAAAAAATCACTGCATA  >  NZ_CP009273/1116583‑1116697                         |                                                                                            catATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGG‑Cg                           >  1:943319/1‑90 (MQ=255)                  ttGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGG‑CGACCCGGCAAAAAAAATc          >  1:403356/1‑90 (MQ=255)                    gtgCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGG‑CGACCCGGCAAAAAAAATCAc        <  2:403356/90‑1 (MQ=255)                         attattTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAG‑AAAATTAAAAAGCCGGGGCCGACCGGGAAAAAAAAACCA‑TGCata  >  2:822034/1‑90 (MQ=255)                         |                                                                                            CATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGG‑CGACCCGGCAAAAAAAATCACTGCATA  >  NZ_CP009273/1116583‑1116697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑