| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP009273 | 1,613,631 | Δ3 bp | coding (255‑257/435 nt) | marR → | multiple antibiotic resistance transcriptional regulator MarR |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP009273 | 1613631 | 1613633 | 3 | 10 [0] | [0] 10 | marR | multiple antibiotic resistance transcriptional regulator MarR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 1613630 | 0 (0.000) | 10 (0.490) | 10/166 | 0.6 | 100% | coding (254/435 nt) | marR | multiple antibiotic resistance transcriptional regulator MarR |
| ? | NZ_CP009273 | 1613634 = | 0 (0.000) | coding (258/435 nt) | marR | multiple antibiotic resistance transcriptional regulator MarR | |||||
AACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTT > NZ_CP009273/1613552‑1613721 | ttgaactgaaaaaggtattgtcggtcgacctgggagcactgacccgtatgctggatcgcctggtctgtaaaggctgggtggaGTTGCCGa < 1:556535‑M2/8‑1 (MQ=255) ttgtcggtcgacctgggagcactgacccgtatgctggatcgcctggtctgtaaaggctgggtggaGTTGCCGAACCCGAATGACAAgcgc > 1:244417‑M2/66‑90 (MQ=255) ggtcgacctgggagcactgacccgtatgctggatcgcctggtctgtaaaggctgggtggaGTTGCCGAACCCGAATGACAAGCGCGGCGt > 2:598984‑M2/61‑90 (MQ=255) gtcgacctgggagcactgacccgtatgctggatcgcctggtctgtaaaggctgggtggaGTTGCCGAACCCGAATGACAAGCGCGGCGTa < 2:226015‑M2/31‑1 (MQ=255) gacccgtatgctggatcgcctggtctgtaaaggctgggtggaGTTGCCGAACCCGAATGACAAGCgcgg > 1:358149‑M2/43‑69 (MQ=255) gacccgtatgctggatcgcctggtctgtaaaggctgggtggaGTTGCCGAACCCGAATGACAAGCgcgg < 2:358149‑M2/27‑1 (MQ=255) gcctggtctgtaaaggctgggtggaGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAatat > 1:495576‑M2/26‑90 (MQ=255) gtaaaggctgggtggaGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAAt > 2:10728‑M2/17‑90 (MQ=255) aaggctgggtggaGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGcc < 2:16104‑M2/77‑1 (MQ=255) gaGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGtt < 1:66265‑M2/88‑1 (MQ=255) | AACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTT > NZ_CP009273/1613552‑1613721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |