| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,236,503 | G→A | T210M (ACG→ATG) | folE ← | GTP cyclohydrolase I FolE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,236,503 | 0 | G | A | 100.0% | 65.9 / NA | 18 | T210M (ACG→ATG) | folE | GTP cyclohydrolase I FolE |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/7); total (11/7) | |||||||||||
TCGAGCGTGACGTTGCGCTCCATGGTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCGTATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGATGCCACGCGCCTTCACGCA > NZ_CP009273/2236424‑2236588 | tCGAGCGTGACGTTGCGCTCCATGGTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACt < 2:79266/90‑1 (MQ=255)tCGAGCGTGACGTTGCGCTCCATGGTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACt < 1:254026/90‑1 (MQ=255) tGCGCTCCATGGTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAAt > 1:554963/1‑90 (MQ=255) tGCGCTCCATGGTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAAt < 2:139120/90‑1 (MQ=255) ggTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATccacca < 1:127233/86‑1 (MQ=255) ggTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATccacca > 2:127233/1‑86 (MQ=255) tGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCg > 1:301171/1‑90 (MQ=255) tttAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAagag < 1:170152/79‑1 (MQ=255) tttAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAagag > 2:170152/1‑79 (MQ=255) tttAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTc > 1:512592/1‑90 (MQ=255) gTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACt > 2:514400/1‑90 (MQ=255) gtgATGACGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGt < 2:72734/90‑1 (MQ=255) cGCACAGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATcg > 2:313502/1‑90 (MQ=255) aGCGCGCAGAAACTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGAt > 1:201928/1‑90 (MQ=255) aCTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGATGCCACGCGCCt > 2:353919/1‑90 (MQ=255) aCTCGTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGATGCCACGCGCCt > 1:15354/1‑90 (MQ=255) gTGGCGCATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGATGCCACGCGCCTTCAc < 1:407965/90‑1 (MQ=255) gcgcATATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGATGCCACGCGCCTTCACGCa > 1:245245/1‑90 (MQ=255) | TCGAGCGTGACGTTGCGCTCCATGGTTCCTGCCTTTTAATCAGTTGTGATGACGCACAGCGCGCAGAAACTCGTGGCGCGTATTCTGACTGGATTTGAACAATCCACCAAGAGAGGTCGTTGTCGTGGCACTGGTTGCATCGCGGATGCCACGCGCCTTCACGCA > NZ_CP009273/2236424‑2236588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |