Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3633460	3633578	119	3 [2]	[2] 3	[uspA]	[uspA]

GTCTCTATGGCTCGCCCCTACAATGCGAAAGTTTCTCTGATCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACA  >  NZ_CP009273/3633540‑3633668                                        |                                                                                          gTCTCTATGGCTCGCCCCTACAATGCGAAAGTTTCTCTGATCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGAtgtg                                         <  2:49082/90‑1 (MQ=255)               ccccTACAATGCGAAAGTTTCTCTGATCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGatat                           >  1:582837/1‑90 (MQ=255)                                        aTCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGGGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGaca  <  2:582837/90‑1 (MQ=255)                                        |                                                                                          GTCTCTATGGCTCGCCCCTACAATGCGAAAGTTTCTCTGATCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACA  >  NZ_CP009273/3633540‑3633668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑