Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1362857	1362880	24	3 [2]	[2] 3	pspA	phage shock protein PspA

GAAGCGGAAGCAGAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGTTTGCCGAACTGAAAGCCGATGATGCAATCAGCGAACAACTGGCACA  >  NZ_CP009273/1362870‑1362970            |                                                                                          gaagcggaagcAAAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGCTTGCCGAACTGAAAGCCGATGATGCAATCAGCGaa             <  2:631864/90‑1 (MQ=255)       gaagcAGAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGTTTGCCGAACTGAAAGCCGAGGATGCAATCAGCGAACAACTg       >  2:571073/1‑90 (MQ=255)            aGAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGTTTGCCGAACTGAAAGCCGATGATGCAATCAGCGAACAACTGGcaca  <  1:494288/90‑1 (MQ=255)            |                                                                                          GAAGCGGAAGCAGAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGTTTGCCGAACTGAAAGCCGATGATGCAATCAGCGAACAACTGGCACA  >  NZ_CP009273/1362870‑1362970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑