Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	518572	518587	16	2 [0]	[1] 3	ybbP/rhsD	ABC transporter permease/rhs element protein RhsD

AATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAG  >  NZ_CP009273/518528‑518571                                            | aaTTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAg  <  1:325262/44‑1 (MQ=255) aaTTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAg  >  2:325262/1‑44 (MQ=255)                                            | AATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAG  >  NZ_CP009273/518528‑518571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑