Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3632685	3638975	6291	2 [0]	[1] 2	uspB–[rlmJ]	uspB,uspA,BW25113_RS26225,BW25113_RS26230,dtpB,rsmJ,prlC,[rlmJ]

AGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCGTACATCAATGTGGTAAAACACTTCAACCGTAGCGGTCAGTTGCGTTACTACCCCGGTTCGCCGTTGATTGCTCGCCTGCTA  >  NZ_CP009273/3638911‑3639065                                                                  |                                                                                          aGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCGGCCATCAATGTGGTaa                                                                   >  2:402618/1‑90 (MQ=255)                                                                  cTGGAGGCGTACATCAATGTGGTAAAACGCTTCAACCTTAGCGGTCAGTTGCGTTACTGCCCCGGTTCGCCGTTGATTGCTCGCCTGCTa  <  1:402618/90‑1 (MQ=255)                                                                  |                                                                                          AGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCGTACATCAATGTGGTAAAACACTTCAACCGTAGCGGTCAGTTGCGTTACTACCCCGGTTCGCCGTTGATTGCTCGCCTGCTA  >  NZ_CP009273/3638911‑3639065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑