Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798187	3798216	30	2 [1]	[0] 2	rfaS	LPS core biosynthesis protein RfaS

TCATTCCCTATAAATCTATGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAA  >  NZ_CP009273/3798097‑3798195                                                                                          |          tCATTCCCTATAAATCTATGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCtt           <  1:429129/90‑1 (MQ=255)          ataAATCTATGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCaaa  <  2:203122/90‑1 (MQ=255)                                                                                          |          TCATTCCCTATAAATCTATGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAA  >  NZ_CP009273/3798097‑3798195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑