New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 4333102 = | 73 (1.360) | 3 (0.060) | 3/152 | 4.4 | 4.5% | intergenic (+19/‑84) | melA/melB | alpha‑galactosidase/melibiose:sodium transporter MelB |
? | NZ_CP009273 | 4333128 = | 62 (1.280) | intergenic (+45/‑58) | melA/melB | alpha‑galactosidase/melibiose:sodium transporter MelB | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TGAAATGCTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/4333197‑4333102 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcaCACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTC > NZ_CP009273/4333128‑4333212 TGAAATGCTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCC < 1:873507/90‑1 TGAAATGCTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCC < 2:342025/90‑1 TGCTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGC < 1:994136/90‑1 TGCTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGC < 2:866378/90‑1 CTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGCAC < 1:398723/90‑1 CGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGC < 1:591832/71‑1 CGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGC > 2:591832/1‑71 ACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGCACACCTCTGACGATACCAATAACAGAAGGC < 2:755243/90‑1 GCCTTCTGTTATTGGTATCGTCAGAGGTGGGCGCCGGAATAAATCCCCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGT < 1:1312428/90‑1 CGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCG > 1:5693/1‑41 CGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCG < 2:5693/41‑1 GCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTC > 1:117722/1‑90 GCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTC < 1:595136/90‑1 GCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTC > 2:902548/1‑90 TGAAATGCTCATAGGGTATCGGGTCGCTGTTACCAACGCCCGCCTTCTGTTATTGGTATCGTCAGAGGTGTGCGCCGGAATAAATCCCCCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/4333197‑4333102 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcaCACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTC > NZ_CP009273/4333128‑4333212 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |