| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 3696656 = | 64 (1.190) | 3 (0.060) | 3/152 | 4.4 | 5.6% | coding (553/984 nt) | dppD | dipeptide ABC transporter ATP‑binding protein |
| ? | NZ_CP009273 | 3696733 = | 44 (0.910) | coding (476/984 nt) | dppD | dipeptide ABC transporter ATP‑binding protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGGTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGG > NZ_CP009273/3696568‑3696745 | aGGTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTcc < 2:1080331/90‑1 (MQ=255) ggTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCa > 2:1028742/1‑90 (MQ=255) ggTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCa > 2:438356/1‑90 (MQ=255) ggTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCa > 1:1339835/1‑90 (MQ=255) ggTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCa > 1:270341/1‑90 (MQ=255) aTGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAgcgc > 1:1035064/1‑90 (MQ=255) aTGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAgcgc > 1:252690/1‑90 (MQ=255) tGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGcgcg > 2:439090/1‑90 (MQ=255) aaTTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCggtggt > 1:570225/1‑90 (MQ=255) aTTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTc > 1:218195/1‑90 (MQ=255) aTTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTc > 2:91474/1‑90 (MQ=255) ttAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCg < 2:354731/90‑1 (MQ=255) cacCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTc > 2:534353/1‑90 (MQ=255) cacCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTc > 2:784083/1‑90 (MQ=255) aGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCg > 1:948132/1‑90 (MQ=255) gcgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCgg > 1:520307/1‑90 (MQ=255) gcgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCgg > 1:369825/1‑90 (MQ=255) gcgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCgg > 2:450211/1‑90 (MQ=255) gcgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCgg > 1:251734/1‑90 (MQ=255) gcgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGGAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCgg > 1:752877/1‑90 (MQ=255) ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCaa < 1:440938/90‑1 (MQ=255) ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCaa < 2:1537150/90‑1 (MQ=255) ttCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATcagc < 1:1348453/90‑1 (MQ=255) ctctTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATcagcag > 1:414189/1‑90 (MQ=255) ctctTTCTGCTGCAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCCATcagcag > 1:736475/1‑90 (MQ=255) ctTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGtt > 2:1266764/1‑90 (MQ=255) tgctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGc > 2:1538792/1‑90 (MQ=255) tgctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGc > 2:664431/1‑90 (MQ=255) tgctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGc > 2:1434827/1‑90 (MQ=255) gTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAc < 2:270341/90‑1 (MQ=255) gTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAc < 1:438356/90‑1 (MQ=255) tAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACa < 1:664431/90‑1 (MQ=255) tAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACa < 2:1340961/90‑1 (MQ=255) tAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACa < 1:1249015/90‑1 (MQ=255) tCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCa < 1:1055247/90‑1 (MQ=255) cagcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt > 1:957339/1‑90 (MQ=255) agcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATc < 2:520500/90‑1 (MQ=255) agcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATc < 1:824127/90‑1 (MQ=255) agcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATc < 2:1035064/90‑1 (MQ=255) gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCa > 1:349630/1‑90 (MQ=255) gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCa < 2:251734/90‑1 (MQ=255) gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGACAATCAGCAGTTTTGGCCGACAGGCAATCGCCa > 2:786848/1‑90 (MQ=255) agtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg > 2:129566/1‑90 (MQ=255) agtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg > 1:1396004/1‑90 (MQ=255) agtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg > 1:265479/1‑90 (MQ=255) ttCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGc < 2:369825/90‑1 (MQ=255) tCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCg > 2:531361/1‑90 (MQ=255) gatgatTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGat > 1:65696/1‑90 (MQ=255) atgatTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt > 2:693802/1‑77 (MQ=255) atgatTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt < 1:693802/77‑1 (MQ=255) atgatTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatc < 2:948132/90‑1 (MQ=255) atgatTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatc > 2:226847/1‑90 (MQ=255) gatTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatcat < 1:91474/90‑1 (MQ=255) gcgcCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAcgc > 2:1422065/1‑90 (MQ=255) gcCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACgcgc < 2:417907/90‑1 (MQ=255) ccTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCt < 1:1539643/90‑1 (MQ=255) ccTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCt < 2:265479/90‑1 (MQ=255) gAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGc > 1:1472895/1‑90 (MQ=255) ggTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACgcgc > 1:336985/1‑82 (MQ=255) ggTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACgcgc < 2:336985/82‑1 (MQ=255) cACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgcc < 2:65696/90‑1 (MQ=255) cACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgcc < 1:1434827/90‑1 (MQ=255) cACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgcc < 1:1267899/90‑1 (MQ=255) gTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgccgcc > 2:1403748/1‑90 (MQ=255) ccAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCgg < 2:1401514/90‑1 (MQ=255) | AGGTCATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGG > NZ_CP009273/3696568‑3696745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |