| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 348977 = | 109 (2.050) | 4 (0.090) | 3/142 | 3.9 | 4.0% | coding (561/1887 nt) | prpE | propionate‑‑CoA ligase |
| ? | NZ_CP009273 | 349105 = | 101 (2.220) | coding (689/1887 nt) | prpE | propionate‑‑CoA ligase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 116 total aligned reads displayed.
AAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGG > NZ_CP009273/349018‑349191 | aaaTGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAAt < 2:1092924/90‑1 (MQ=255)aaaTGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAAt < 1:285822/90‑1 (MQ=255) gcgcgcGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCaa > 2:1135090/1‑89 (MQ=255) gcgcgcGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCaa < 1:1135090/89‑1 (MQ=255) gcgcgcGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAAc > 1:1055838/1‑90 (MQ=255) gcgcgcGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAAc > 2:454315/1‑90 (MQ=255) cgcgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaa < 1:714744/90‑1 (MQ=255) gcgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaaa < 2:756622/90‑1 (MQ=255) gcgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaaa < 1:933771/90‑1 (MQ=255) gcgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaaa < 1:1394787/90‑1 (MQ=255) gcgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaaa < 2:1160758/90‑1 (MQ=255) gcgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaaa < 2:128051/90‑1 (MQ=255) gTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAAcc < 2:1039702/90‑1 (MQ=255) gTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAAcc < 1:1574614/90‑1 (MQ=255) aGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAAcctcc > 1:1353868/1‑90 (MQ=255) cgggcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTg < 1:663502/90‑1 (MQ=255) ggcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa < 2:1439621/90‑1 (MQ=255) ggcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa < 2:1453747/90‑1 (MQ=255) ggcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa < 2:1364847/90‑1 (MQ=255) ggcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa < 2:381328/90‑1 (MQ=255) gcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCAt < 1:1275118/90‑1 (MQ=255) gcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCAt < 1:381272/90‑1 (MQ=255) gcgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCAt < 2:275852/90‑1 (MQ=255) gggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc < 2:1036308/90‑1 (MQ=255) gggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc < 1:1184184/90‑1 (MQ=255) gggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc < 1:116558/90‑1 (MQ=255) gggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc < 2:1379061/90‑1 (MQ=255) tGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc < 2:1392729/86‑1 (MQ=255) tGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc < 2:1358707/86‑1 (MQ=255) tGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATtc > 1:1358707/1‑86 (MQ=255) tGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGGGGCTGGAATCCAACGAAACCTCCTGCATtc > 1:1392729/1‑86 (MQ=255) gttgATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTac < 1:1199044/87‑1 (MQ=255) gTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTac < 1:335115/90‑1 (MQ=255) gTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTac < 2:408915/90‑1 (MQ=255) gTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTac < 1:1490649/90‑1 (MQ=255) gTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTac < 1:1078414/90‑1 (MQ=255) ttCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa > 2:1122126/1‑76 (MQ=255) ttCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa < 1:1122126/76‑1 (MQ=255) gcgTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGc < 1:1273829/90‑1 (MQ=255) cgtcgtTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCa > 1:1012494/1‑90 (MQ=255) cgtcgtTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCa > 1:1284745/1‑90 (MQ=255) tcgtTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACg < 2:775289/90‑1 (MQ=255) tGCGCCATCAACACATCGGCGCGCGGATACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGAcca > 1:1166715/1‑89 (MQ=255) gcgcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa < 2:1409641/65‑1 (MQ=255) gcgcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCa > 1:1409641/1‑65 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:1498630/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:167226/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:534042/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:682955/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:842853/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:885000/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 1:1058432/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:903568/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 1:1146741/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 1:1420212/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 1:87216/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 1:1576796/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 1:160931/90‑1 (MQ=255) gcCATCAACACATCGGCGCGCGGGTACAGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:672732/90‑1 (MQ=255) aTCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAAt < 2:204717/42‑1 (MQ=255) aTCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAAt > 1:204717/1‑42 (MQ=255) aTCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTg < 1:54955/58‑1 (MQ=255) aTCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTg > 2:54955/1‑58 (MQ=255) aTCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAAc > 2:1368090/1‑90 (MQ=255) aTCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAAc > 2:1527470/1‑90 (MQ=255) cAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaa < 2:1144159/48‑1 (MQ=255) acacATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTaa < 2:81484/90‑1 (MQ=255) caTCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCa > 1:134891/1‑38 (MQ=255) caTCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCa < 2:134891/38‑1 (MQ=255) tCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa > 1:325511/1‑78 (MQ=255) tCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:325511/78‑1 (MQ=255) tCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCg > 2:1473386/1‑90 (MQ=255) tCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCg > 2:154350/1‑90 (MQ=255) cGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCaa < 1:562642/36‑1 (MQ=255) cGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCaa > 2:562642/1‑36 (MQ=255) cGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGt > 2:140249/1‑90 (MQ=255) gcgcgcGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:1115120/75‑1 (MQ=255) gcgcgcGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa > 1:1115120/1‑75 (MQ=255) gcgcgcGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc < 2:324497/90‑1 (MQ=255) gcgcgcGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc > 2:692562/1‑90 (MQ=255) gcgcgcGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc < 2:1120904/90‑1 (MQ=255) gcgcgcGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc < 1:1495459/90‑1 (MQ=255) gcgcgGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAg > 2:84995/1‑90 (MQ=255) gcgcgGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAg > 2:765941/1‑90 (MQ=255) ccGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTc < 1:1400525/90‑1 (MQ=255) ggTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTcgg < 1:1209484/90‑1 (MQ=255) gtggcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTcggc < 1:1527470/90‑1 (MQ=255) gtggcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTcggc < 1:1473386/90‑1 (MQ=255) gtggcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTcggc < 1:1408508/90‑1 (MQ=255) tggcgtggcTGGAATCCAACGAAACCTCCTGCATtc > 2:1560307/1‑36 (MQ=255) tggcgtggcTGGAATCCAACGAAACCTCCTGCATtc < 1:1560307/36‑1 (MQ=255) tggcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTcggcg < 2:1353868/90‑1 (MQ=255) ggcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc > 2:1470396/1‑74 (MQ=255) gcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTac < 1:776912/39‑1 (MQ=255) gcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc < 2:833509/73‑1 (MQ=255) gcgtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGc > 1:833509/1‑73 (MQ=255) gtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa > 1:92151/1‑56 (MQ=255) ggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa > 1:584111/1‑54 (MQ=255) ggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCa < 2:584111/54‑1 (MQ=255) tGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCgg < 2:614500/90‑1 (MQ=255) | AAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGG > NZ_CP009273/349018‑349191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |