BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	360104 =	NA (NA)	148 (2.780)	51/166	0.0	NA	intergenic (‑35/+251)	lacZ/BW25113_RS23320	beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
*	?	NZ_CP009273	= 360286	NA (NA)	148 (2.780)	51/166	0.0	NA	intergenic (‑217/+69)	lacZ/BW25113_RS23320	beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein

Only 100 of 166 total aligned reads displayed.

TCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGC  >  NZ_CP009273/360197‑360371

tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                       <  1:1493793/90‑1 (MQ=38)

tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                       <  1:249531/90‑1 (MQ=38)

 cAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGACGCCTGgggaattg                                                                                      >  1:530187/1‑90 (MQ=255)

   ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggg                                                                                    >  1:1566368/1‑90 (MQ=255)

   ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                       <  1:1471831/87‑1 (MQ=38)

   ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                       >  2:1471831/1‑87 (MQ=38)

       agCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaatt                                                                                <  1:1528534/90‑1 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                       <  2:32082/82‑1 (MQ=38)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:567326/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:265335/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:324141/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:412596/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  2:1123204/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:773878/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  2:1245153/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  2:177683/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  2:256863/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  2:936431/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  2:968396/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:13762/1‑90 (MQ=255)

        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                               >  1:1117808/1‑90 (MQ=255)

             cACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                          >  2:360225/1‑90 (MQ=255)

                cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGa                                                                       <  2:324141/90‑1 (MQ=255)

                 gACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGaa                                                                      <  2:1152730/90‑1 (MQ=255)

                  acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                     <  2:275137/90‑1 (MQ=255)

                   caaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                    <  2:707030/90‑1 (MQ=255)

                     aacaacAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACg                                                                  >  2:1123500/1‑90 (MQ=255)

                        aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGaaa                                                               <  2:1155534/90‑1 (MQ=255)

                         acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAg                                                              >  2:137293/1‑90 (MQ=255)

                         acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAg                                                              <  2:265335/90‑1 (MQ=255)

                          caGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAgg                                                             <  1:44094/90‑1 (MQ=255)

                            gATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGc                                                           >  2:408235/1‑90 (MQ=255)

                              tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCt                                                         <  1:968396/90‑1 (MQ=255)

                               aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTc                                                        <  1:177683/90‑1 (MQ=255)

                               aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTc                                                        <  1:696297/90‑1 (MQ=255)

                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                      >  2:38624/1‑90 (MQ=255)

                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                      <  1:38624/90‑1 (MQ=255)

                                     aaaGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                  <  1:950448/90‑1 (MQ=255)

                                      aaGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATAc                                                 >  2:1177595/1‑90 (MQ=255)

                                        ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                               <  1:1065250/90‑1 (MQ=255)

                                          cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCt                                             <  1:360225/90‑1 (MQ=255)

                                           ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                            <  2:777956/90‑1 (MQ=255)

                                           ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                            <  2:819716/90‑1 (MQ=255)

                                           ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                            <  1:906383/90‑1 (MQ=255)

                                             aGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAg                                                              >  2:1401674/1‑70 (MQ=255)

                                             aGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                  <  1:1318483/82‑1 (MQ=255)

                                             aGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                  >  2:1318483/1‑82 (MQ=255)

                                                 tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                      <  1:895886/90‑1 (MQ=255)

                                                 tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                      <  2:82112/90‑1 (MQ=255)

                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  2:1538128/90‑1 (MQ=255)

                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  2:185792/90‑1 (MQ=255)

                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  2:1193227/90‑1 (MQ=255)

                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  1:1123204/90‑1 (MQ=255)

                                                  ttCGACTGAGCCTTTCGTTTTATTTGACGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  2:530187/90‑1 (MQ=255)

                                                   tCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                    >  2:204841/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGGATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  1:1463171/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGaa                                                                      <  1:685780/51‑1 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                    >  2:1434074/1‑85 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                    <  1:1434074/85‑1 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                      <  2:591251/83‑1 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  1:1428078/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  1:1241334/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  1:1417862/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  1:317643/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  2:753892/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  2:1440646/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  2:48194/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  2:1191233/1‑90 (MQ=255)

                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                               >  2:687818/1‑90 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  1:271508/83‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              <  2:388603/90‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              >  2:487454/1‑90 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              <  2:495072/90‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              <  2:641913/90‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              <  1:204841/90‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              >  2:1370339/1‑90 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              <  2:1299489/90‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              <  1:707494/90‑1 (MQ=255)

                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              >  1:732354/1‑90 (MQ=255)

                                                          aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                             >  2:1538329/1‑90 (MQ=255)

                                                          aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                             >  1:465567/1‑90 (MQ=255)

                                                             cTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTc                          <  1:136425/90‑1 (MQ=255)

                                                              tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                         <  1:1029484/90‑1 (MQ=255)

                                                              tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                         >  1:789046/1‑90 (MQ=255)

                                                                  gTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCACGTGATACGCCTATTTTTATAGGTTAATGTCATggg                     <  1:152422/90‑1 (MQ=255)

                                                                   ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                         <  1:1358777/85‑1 (MQ=255)

                                                                   ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGa                    <  1:603481/90‑1 (MQ=255)

                                                                   ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGa                    <  2:757478/90‑1 (MQ=255)

                                                                     ttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCt                                             <  1:982496/63‑1 (MQ=255)

                                                                     ttATTTGATGCCTGGGGAATTGGGAATTAATACTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAg                  >  2:914599/1‑90 (MQ=255)

                                                                               ccTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa        >  1:188233/1‑90 (MQ=255)

                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                            <  1:1356788/52‑1 (MQ=255)

                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                            >  2:1356788/1‑52 (MQ=255)

                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     <  1:1563425/59‑1 (MQ=255)

                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     >  2:1563425/1‑59 (MQ=255)

                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                              >  2:1105731/1‑66 (MQ=255)

                                                                                  ggggAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCa     <  1:1527059/90‑1 (MQ=255)

                                                                                     gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGc  <  1:1191233/90‑1 (MQ=255)

                                                                                     gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGc  <  2:899732/90‑1 (MQ=255)

                                                                                        ttgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                     >  2:728975/1‑52 (MQ=255)

TCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGC  >  NZ_CP009273/360197‑360371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.