Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1526036	1526056	21	3 [1]	[0] 2	BW25113_RS07655/BW25113_RS07660	ISAs1 family transposase/ISAs1‑like element ISEc5 family transposase

AATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAA  >  NZ_CP009273/1526057‑1526146 |                                                                                          aaTTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATaa  >  1:137932/1‑90 (MQ=39) aaTTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATaa  >  1:207166/1‑90 (MQ=39) |                                                                                          AATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAA  >  NZ_CP009273/1526057‑1526146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑