Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100617	2100701	85	2 [1]	[1] 5	wzy	O16 family O‑antigen polymerase

GTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATA  >  NZ_CP009273/2100673‑2100772                              |                                                                       gTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGAt            >  2:320209/1‑90 (MQ=255)                              gatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCat        <  1:114024/65‑1 (MQ=255)                              gatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCat        >  2:114024/1‑65 (MQ=255)                              gatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCata  <  1:442538/71‑1 (MQ=255)                              gatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCata  >  2:442538/1‑71 (MQ=255)                              |                                                                       GTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATA  >  NZ_CP009273/2100673‑2100772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑