Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3792815	3792825	11	3 [1]	[2] 3	waaZ	3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ

AATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTT  >  NZ_CP009273/3792819‑3792915        |                                                                                          aaTAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATc         <  2:520860/90‑1 (MQ=255)   tAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATccc       <  1:598543/90‑1 (MQ=255)        gTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACtt  >  1:638522/1‑90 (MQ=255)        |                                                                                          AATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTT  >  NZ_CP009273/3792819‑3792915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑