Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	578977	578987	11	2 [0]	[0] 2	BW25113_RS26085/appY	tail fiber assembly protein/DNA‑binding transcriptional activator AppY

TGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAACAACA  >  NZ_CP009273/578935‑578976                                          | tGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAacaaca  <  1:601957/42‑1 (MQ=255) tGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAacaaca  >  2:601957/1‑42 (MQ=255)                                          | TGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAACAACA  >  NZ_CP009273/578935‑578976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑