Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3354280 3354290 11 3 [0] [1] 3 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein

CCTTAATTATCTATATATTTTCCTATTTTTCAGCGCAAACATTCATGTAATGAATAATTATCACCACAAACCACCTCACCAGCACCTTAT  >  NZ_CP009273/3354288‑3354377
   |                                                                                      
ccTTAATTATCTATATATTTTCCTATTTTTCAGCGCAAACATTCATGTAATGAATAATTATCACCACAAACCACCTCACCAGCACCttat  <  1:88276/90‑1 (MQ=255)
   tAATTATCTATATATTTTCCTATTTTTCAGCGCaa                                                      >  1:5150/1‑35 (MQ=255)
   tAATTATCTATATATTTTCCTATTTTTCAGCGCaa                                                      <  2:5150/35‑1 (MQ=255)
   |                                                                                      
CCTTAATTATCTATATATTTTCCTATTTTTCAGCGCAAACATTCATGTAATGAATAATTATCACCACAAACCACCTCACCAGCACCTTAT  >  NZ_CP009273/3354288‑3354377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: