| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 137 (2.900) | 50/168 | 0.0 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
Only 100 of 134 total aligned reads displayed.
CGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360018‑360193 | cTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTcc < 1:411094/90‑1 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 2:397569/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 1:967634/1‑90 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 1:864999/90‑1 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:580575/90‑1 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 1:25316/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 2:605572/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 1:336056/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 1:350818/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATACCGATCCCCAATTCCTGGc < 1:754097/90‑1 (MQ=255) gCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt > 1:970243/1‑90 (MQ=255) gCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt > 2:380544/1‑90 (MQ=255) gCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt > 2:860393/1‑90 (MQ=255) ggCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGttt > 2:1269359/1‑90 (MQ=255) gCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 2:877670/1‑90 (MQ=255) gCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 2:303994/1‑90 (MQ=255) tACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATgg > 2:776281/1‑90 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg > 2:32039/1‑90 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 2:1137845/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 1:68415/1‑87 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc < 1:819760/90‑1 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc < 2:943530/90‑1 (MQ=255) cgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCt < 2:1003952/90‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTg < 1:155129/90‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTg < 1:138684/90‑1 (MQ=255) ccaccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGc > 2:609134/1‑90 (MQ=255) caccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGcc < 2:1372741/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCa < 2:1211012/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCa < 2:970243/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCa < 2:939600/90‑1 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGTCCCTCCC‑GGCGcccc > 2:767129/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCGccc‑cccccccc > 2:1311084/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCGccc‑cccccccc > 2:1099230/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGccc‑cccccccc > 2:1018436/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGccc‑cccccccc > 1:395610/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGccc‑cccccccc > 1:1038808/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGccc‑cccccccc > 2:487724/1‑89 (MQ=39) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCgg < 2:1285500/90‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCa < 2:879175/55‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCa > 1:879175/1‑55 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCC‑CCCCCCCCCCcgg > 2:573525/1‑90 (MQ=38) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGt < 2:632248/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGt < 2:644196/90‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCTGCCC‑CCCCCCCCCCCGGCCggt > 2:78879/1‑88 (MQ=37) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCGCCCGGCCACCCCCCGGGcggg > 1:542321/1‑87 (MQ=37) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc < 2:199801/67‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc > 1:199801/1‑67 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc < 2:888923/67‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTg > 1:216131/1‑69 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTg < 2:216131/69‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGcc > 1:888923/1‑67 (MQ=255) gatgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg > 1:1295240/1‑45 (MQ=255) gatgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:1295240/45‑1 (MQ=255) tAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGCCC‑CCCCCCCCCCCGGCCGCTGCTTTGcc > 2:900791/1‑89 (MQ=25) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCTTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCaa < 2:1213677/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCaa < 1:1269359/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCaa < 1:75161/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCaa < 1:1255715/90‑1 (MQ=255) gCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCTGCCC‑CCCCCCCCCCCCGCCCCTGCTTTGCCACg > 1:178871/1‑90 (MQ=21) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCTGCCC‑CCCCCCCCCCCCGCCGGTGCTTTTCCACGTTc > 1:21623/1‑90 (MQ=21) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCCCCC‑CCCCCCCCCCCGGCCGCTGCTTCGCAACCTTc > 2:917863/1‑90 (MQ=21) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTCCCC‑CCCACCCTCCGGGCGGTTGCTTTGCAACATTc > 2:197370/1‑90 (MQ=21) aTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGCCC‑CCCCCCCCCCCGGCCGTTGCTTCGCAACGTTCAAAACCg > 2:43072/1‑90 (MQ=18) agaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTc < 1:901690/90‑1 (MQ=255) agaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGCCC‑CCCCCCCCCCCGGCCGGTGCTTCGCAAACTTCAAATACCCTc > 2:812870/1‑90 (MQ=17) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggc < 1:1137845/90‑1 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGGGGTCCCGCCC‑CCCCCCCCCCCGGCCCCTGCTTCTCAACATTCAAAACCCCCCCccgcggg > 2:1346163/1‑89 (MQ=9) gATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGCCC‑CCCCCCCCCCCCGCCCCTGCCTCTCCACCCTCAAAACCCCTCCccgcccc > 1:1014108/1‑87 (MQ=9) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:976521/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 1:352637/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 1:726478/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 1:1142193/90‑1 (MQ=255) tCCCCAATTCCGGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 1:1371142/90‑1 (MQ=255) ccAGTTCCTGGCAGTTTATGGCGGGCGTCCTGCCG‑GCGCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 1:822135/90‑1 (MQ=11) ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 1:825182/90‑1 (MQ=255) ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 1:397569/90‑1 (MQ=38) ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 2:84527/90‑1 (MQ=38) aaTTCCTGGCAGTTTATGGGGGGCGTCCTGCCC‑GCGTCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:204221/90‑1 (MQ=11) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCGCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:942139/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:917863/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1311084/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:957764/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:947726/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:65774/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:100211/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:543152/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:590456/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:815416/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:64474/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:645208/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:254975/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:673/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:734747/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:681690/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:676937/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:678120/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:926251/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:540397/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:503758/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:961717/90‑1 (MQ=35) | CGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCC‑GCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360018‑360193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |