Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1459394	1459517	124	6 [5]	[5] 6	BW25113_RS25580	BW25113_RS25580

TTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTATGTTTGATTAGATAATAATCTACTGGCAATATTGGATGTCTTCTATGTTTTAAATAACTAATTGGTCGGGTT  >  NZ_CP009273/1459483‑1459607                                    |                                                                                          ttCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGaa                                                                              >  1:571136/1‑49 (MQ=255) ttCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGaa                                                                              <  2:571136/49‑1 (MQ=255) ttCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTATGTTTGATTAGATAATAATCTACTGGCAATATTGGAt                                     <  1:265288/90‑1 (MQ=255)                               taATTGTGAATTATAGGAAAGTATGTTTGATTAGATAATAATCTACTGGCAATATTGGATGTCTTCTATGTTTTAAATAACTAATTGGTc       <  1:1333095/90‑1 (MQ=255)                               taATTGTGAATTATAGGAAAGTATGTTTGATTAGATAATAATCTACTGGCAATATTGGATGTCTTCTATGTTTTAAATAACTAATTGGTc       <  1:207801/90‑1 (MQ=255)                                    gtgAATTATAGGAAAGTATGTTTGATTAGATAATAATCTACTGGCAATATTGGATGTCTTCTATGTTTTAAATAACTAATTGGTCGGGtt  >  2:949064/1‑90 (MQ=255)                                    |                                                                                          TTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTATGTTTGATTAGATAATAATCTACTGGCAATATTGGATGTCTTCTATGTTTTAAATAACTAATTGGTCGGGTT  >  NZ_CP009273/1459483‑1459607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑