Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3792820	3792847	28	2 [0]	[1] 2	waaZ	3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ

TCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAA  >  NZ_CP009273/3792772‑3792819                                                | tctGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGaa  >  1:383637/1‑48 (MQ=255) tctGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGaa  <  2:383637/48‑1 (MQ=255)                                                | TCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAA  >  NZ_CP009273/3792772‑3792819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑