Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	428536	428536	1	2 [0]	[0] 2	nrdR	transcriptional regulator NrdR

TTTCGCCGTGGACACTAAGGTAATTGACTCTCGTCTCGTGGGCGAGGGTTCATCCGTACGC  >  NZ_CP009273/428475‑428535                                                             | tttCGCCGTGAACACTAAGGTAATTGACTCTCGTCTCGTGGGCGAGGGTTCATCCGTAcgc  <  1:249831/61‑1 (MQ=255) tttCGCCGTGAACACTAAGGTAATTGACTCTCGTCTCGTGGGCGAGGGTTCATCCGTAcgc  >  2:249831/1‑61 (MQ=255)                                                             | TTTCGCCGTGGACACTAAGGTAATTGACTCTCGTCTCGTGGGCGAGGGTTCATCCGTACGC  >  NZ_CP009273/428475‑428535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑