Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539239	1539274	36	2 [0]	[1] 2	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

CGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGT  >  NZ_CP009273/1539176‑1539238                                                               | cGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAAttgt  >  1:128339/1‑63 (MQ=255) cGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAAttgt  <  2:128339/63‑1 (MQ=255)                                                               | CGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGT  >  NZ_CP009273/1539176‑1539238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑