| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 349,999 | 0 | T | G | 50.5% | 96.0 / 150.1 | 91 | V528G (GTG→GGG) | prpE | propionate‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (5/40); new base G (46/0); total (51/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-20 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.44e-15 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGC > NZ_CP009273/349913‑350088 | cGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGGATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGaa > 2:1788779/1‑90 (MQ=255) ttGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGaaaa > 2:1990356/1‑89 (MQ=255) ttGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAg > 1:2317519/1‑90 (MQ=255) tGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGgagaga > 2:389669/1‑90 (MQ=255) gCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAAAt > 2:2456902/1‑90 (MQ=255) gCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGGGGCGGGGGGGGGGGGGGAAGaa > 1:2852488/1‑89 (MQ=255) ggCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATgcgc < 1:1990356/90‑1 (MQ=255) ggCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATgcgc < 1:2456902/90‑1 (MQ=255) ggCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATgcgc < 1:1788779/90‑1 (MQ=255) tCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGaa < 1:885489/90‑1 (MQ=255) cGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGaaa < 1:54828/90‑1 (MQ=255) cGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGaaa < 2:2976913/90‑1 (MQ=255) tGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGc > 2:183418/1‑90 (MQ=255) ggggACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAGAAGCGCCGGAA‑ggggg > 1:2170931/1‑88 (MQ=255) gggACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAg < 1:1920494/90‑1 (MQ=255) gACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGTGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAggt < 1:389669/90‑1 (MQ=255) gACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAggt < 2:976987/90‑1 (MQ=255) gcgcgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAGATGCGCTGAAA‑GGGCAgggggg > 2:2652184/1‑89 (MQ=255) gcgcgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAGAAGCGCTGAAA‑GGGGAgggggg > 1:136786/1‑89 (MQ=255) gcgcgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAAAAGCGCTGGAA‑GGGGAgggggc > 1:716352/1‑90 (MQ=255) cgcgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAGATGCGCTGGAA‑AGGGAggggggg > 2:2542966/1‑88 (MQ=255) cgcgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAGAGGCGCTGGAA‑AGGCCggtgggg > 1:2265975/1‑88 (MQ=255) cgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAggtggcggt < 2:2603624/90‑1 (MQ=255) cgAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAggtggcggt < 2:2209638/90‑1 (MQ=255) acagaTTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAggtggcggt < 1:1240309/88‑1 (MQ=255) gaTTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAAAAGGGCTGGAA‑GGGGAgggggggggggg > 1:2511902/1‑89 (MQ=255) gagagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTc < 2:205886/90‑1 (MQ=255) gagagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTc < 1:489824/90‑1 (MQ=255) gagagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTc < 2:2265975/90‑1 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGCGCTGAAA‑GGGGAGGGGGGGGGGGGGTTTGTCA‑t > 2:1210781/1‑90 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGCGCTGAAA‑GGGGAGGGGGCGGGGGGGGTTGTCA‑t > 2:382185/1‑90 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTTGGGGGAAAGATGCGCGGAAA‑AGGGAGGGGGCGGGGGCGTTTGTCA‑t > 2:2473225/1‑90 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGGAGGTGGCGGGGGCGGTTGTCA‑t > 2:1167853/1‑90 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGGAGGGGGGGGGGGGGGTTGTCA‑t > 2:2266484/1‑90 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAGATGCGCTGGAA‑GGGGAGGGGGGGGGGGGGGTTGTCA‑t > 1:391272/1‑90 (MQ=255) gagTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGATGTTGGGGTGGAAAAAGCGCGTAAA‑AGGCAGGGGGGGGGGGGGGTTGTTA‑t > 2:2216872/1‑90 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGCGCTGAAA‑GGGGAGGGGGGGGGGGGGGTTGTcctgt > 2:1240309/1‑86 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAGAAGCGCTGGAA‑GGGGGGGGGGGGGGGGGGGTTGTTA‑ttt > 1:1302304/1‑89 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAGAAGCGCTGAAA‑GGGGAGGGGGGGGGGGGGGTTGTCA‑TTc > 1:581779/1‑90 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGGGGGGGGGGTTTTCA‑TTc > 2:2450350/1‑90 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGGGGGGGGGGTTGTTA‑ttt > 2:1732083/1‑89 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAAATGCGCTGAAA‑GGGCAGGGGGGGGGGGGGGTTTTTA‑TTc > 2:2611293/1‑90 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGTTGGGGGGGAAAAAGCCCTTGAA‑GGGGGGGGGGGGGGGGCGGTTGTCA‑TTc > 1:1724763/1‑90 (MQ=255) gTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAGATGCGCCGAAA‑GGGGAGGGGGGGGGGGGGGTTGTCA‑TTc > 1:754605/1‑90 (MQ=255) tATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTcc < 2:468931/90‑1 (MQ=255) tctcCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGCGGGGGCGGTTGTCA‑TTCCGa > 2:217015/1‑90 (MQ=255) tctcCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGCGGGGGCGTTTGTCA‑TTCCGa > 2:1137336/1‑90 (MQ=255) tctcCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAAAAGCGCCGAAA‑GGGGAGGGGGGGGGGGGGGTTTTTA‑TTTCGa > 1:736225/1‑90 (MQ=255) tctcCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAAAGGGGCTGGAA‑GGGGAGGGGGGGGGGGGGGTTGTCG‑TTCCGa > 1:2138971/1‑90 (MQ=255) tcCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGGAAGATGCGCTGAAA‑GGGGAGGGGGGGGGGGGGGTTGTCA‑TTTCGga‑a > 2:1865759/1‑90 (MQ=255) aGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGGGGCGGGGGCGGTTGTCA‑TTTCGAA‑agag > 2:46965/1‑90 (MQ=255) aGCCATCCGGGCGTTGCCGAAGTGGCGGGGGTTGGGGGGGAAAATGGGCTGGAA‑AGGGAGGGGGGGGGGGGGGTTGTTG‑TTCCGca‑aaaa > 1:1415557/1‑87 (MQ=255) aGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAAATGCGCTGGAA‑GGGGAGGGGGGGGGGGGGGTTGTCC‑TTTCGAA‑agag > 1:2489253/1‑90 (MQ=255) aGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAAATGCGCCGAGA‑GGGGGGGGGGGGGGGGGGGTTGGCA‑TTCCGGA‑agag > 1:1754531/1‑90 (MQ=255) aGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAAAAGGGCTGGAA‑GGGGCGGGGGGGGGGGGGGTTGGCT‑TTTCGGA‑agag > 1:2537401/1‑90 (MQ=255) aTCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGTGAAAGATGCGCTGAAA‑GGGGAGGGGGGGGGGGGGGTTTTGA‑TTTCGAA‑AGAGAGCg > 2:1663436/1‑90 (MQ=255) aTCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGCGGGGGGGGTTGTCA‑TTTCGAA‑AGAGAGCg > 2:84613/1‑90 (MQ=255) aTCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAAAAGGGCCGAAAGGGGCGGGGGGGGGGGGGGTTTG‑CA‑TTTCCAA‑aaagaggg > 1:2720220/1‑88 (MQ=255) aTCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAAAAGAGGGGTAA‑GGGGGGGTGGGGGGGGGGGTTGTGAGTTCCGAagagagag > 2:1244672/1‑90 (MQ=255) tCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGGGGGGGCGGTTGTCA‑TTCCGAA‑AGAGAGCGa > 2:1065490/1‑90 (MQ=255) tCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAGATGCGCCGAAA‑GGGGCGGGGGGGGGGGGGGTTGGTA‑TTCCGGA‑AGAGAGCgg > 1:2698473/1‑89 (MQ=255) tCCGGGCGTTGCCGAAGTGGCGGCGGGTGGGGGGGAAGAGTTGCTTGAA‑GGGGCGGGGGCGGGGGGGGTTGTCA‑TTCCCAA‑agggagggg > 2:2196583/1‑87 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 2:2317519/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 2:2494684/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:1244672/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 2:517423/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:1065490/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:2109047/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:1913724/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:590381/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:1051316/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 2:2071680/90‑1 (MQ=255) ccGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 2:1478496/90‑1 (MQ=255) gggCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAg < 2:581779/90‑1 (MQ=255) gCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTc < 2:2677452/90‑1 (MQ=255) ttGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTgg < 2:136786/90‑1 (MQ=255) ttGCCGAAGTGGCGGTGGTTGGGGGGAAAAATGCGCTGAAA‑AGGCAGGGGGGGGGGGCGGTTGTCA‑TTTCGAA‑AGAGAGCGACAGGCTgg > 2:2753396/1‑90 (MQ=255) tGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGCGCTGAAA‑GGGCAGGGGGGGGGGGGGGTTGTCA‑TTCCGAA‑AAAGAGCGACAGTCTGGa > 2:2845003/1‑90 (MQ=255) gCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGaa < 1:2450350/90‑1 (MQ=255) gCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGaa < 1:579237/90‑1 (MQ=255) ccGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAg < 2:2537401/90‑1 (MQ=255) ccGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAg < 2:1415557/90‑1 (MQ=255) ccGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAg < 2:2852488/90‑1 (MQ=255) aaGTGGCGGTGGGTGGGGGGAAAGATGCGCTGAAA‑GGGGAGGGGGGGGGGGGGTTTGTCA‑TTCCGAA‑AAAGAGCGACAGGCTGGAAGATc > 2:1512598/1‑90 (MQ=255) aGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCg < 1:2845003/90‑1 (MQ=255) ggCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGa < 1:212005/90‑1 (MQ=255) gtTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGgcg < 1:46965/90‑1 (MQ=255) ttGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGgcgc > 2:1922126/1‑90 (MQ=255) ttGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGgcgc > 2:2485799/1‑90 (MQ=255) ggggTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGATAGTCTGGAAGATCGTGATGTGGCGCAc < 2:2353891/90‑1 (MQ=255) ggggTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCAc < 1:2266484/90‑1 (MQ=255) tGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc > 2:1713160/1‑59 (MQ=255) tGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc > 2:1646523/1‑59 (MQ=255) tGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:1646523/59‑1 (MQ=255) tGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGAc < 1:1713160/59‑1 (MQ=255) tGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGc > 1:2230635/1‑90 (MQ=255) tGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGc > 1:1139529/1‑90 (MQ=255) | CGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAA‑GGGCAGGTGGCGGTGGCGTTTGTCA‑TTCCGAA‑AGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGC > NZ_CP009273/349913‑350088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |