Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 1,877,816 T→C pseudogene (408/1482 nt) yeaV → BCCT family transporter YeaV

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092731,877,8160TC100.0% 393.1 / NA 105pseudogene (408/1482 nt)yeaVBCCT family transporter YeaV
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (62/43);  total (62/43)

Only 100 of 105 total aligned reads displayed.

GGCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTTCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCTTGTTGTTAC  >  NZ_CP009273/1877729‑1877902
                                                                                       |                                                                                      
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  2:553366/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  2:723375/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  1:1432293/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  1:2787166/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  1:1661150/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  1:2773752/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCg                                                                                      >  1:2278154/1‑90 (MQ=255)
ggCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAAC‑AAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGc                                                                                     >  2:611653/1‑90 (MQ=255)
      aTTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCa                                                                                <  2:2944271/90‑1 (MQ=255)
       ttAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCaa                                                                               <  2:1661150/90‑1 (MQ=255)
       ttAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCaa                                                                               <  1:1420091/90‑1 (MQ=255)
        tAATCATGGCTTATCGCTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAg                                                                              <  2:1522772/90‑1 (MQ=255)
          aTCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGc                                                                            >  1:2782528/1‑90 (MQ=255)
            cATGGCTTATCACTTTCATGTGCGGAAAAAC‑AAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         <  1:611653/90‑1 (MQ=255)
             aTGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         >  1:263954/1‑90 (MQ=255)
             aTGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         <  2:1794590/90‑1 (MQ=255)
             aTGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         <  2:2886923/90‑1 (MQ=255)
             aTGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         <  1:1430101/90‑1 (MQ=255)
               ggCTTATCACTTTGATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATg                                                                       >  2:1862287/1‑90 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         >  2:2593626/1‑88 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         <  1:1176574/88‑1 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         <  1:2593626/88‑1 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCa                                                                         >  2:1176574/1‑88 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATg                                                                       >  1:1364708/1‑90 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATg                                                                       >  1:1968028/1‑90 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATg                                                                       >  1:1352544/1‑90 (MQ=255)
               ggCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATg                                                                       >  1:2504369/1‑90 (MQ=255)
                gCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATgg                                                                      >  1:1007241/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCa                                                                                <  2:2306319/77‑1 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCa                                                                                >  1:2306319/1‑77 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATgg                                                                      <  1:2686430/87‑1 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATgg                                                                      >  2:2686430/1‑87 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  1:789831/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  2:2232693/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  2:2050703/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  2:2509974/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  2:1938057/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  1:1697401/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  2:2784571/1‑90 (MQ=255)
                   tATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGa                                                                   >  1:2357548/1‑90 (MQ=255)
                     tCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGaaa                                                                 >  1:844417/1‑90 (MQ=255)
                        cTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACt                                                              >  2:2977234/1‑90 (MQ=255)
                        cTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACt                                                              >  1:276337/1‑90 (MQ=255)
                          ttCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTgg                                                            >  1:2465464/1‑90 (MQ=255)
                           tCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGt                                                           <  2:287859/90‑1 (MQ=255)
                            cATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTc                                                          <  1:2509974/90‑1 (MQ=255)
                            cATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTc                                                          <  1:2655038/90‑1 (MQ=255)
                            cATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTc                                                          <  2:2782528/90‑1 (MQ=255)
                             aTGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCg                                                         >  1:2398917/1‑90 (MQ=255)
                               gtgCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGAt                                                       >  2:788064/1‑90 (MQ=255)
                               gtgCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGAt                                                       >  2:2271768/1‑90 (MQ=255)
                               gtgCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGAt                                                       >  1:2590561/1‑90 (MQ=255)
                                 gCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGAttt                                                     >  1:586826/1‑90 (MQ=255)
                                 gCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGAttt                                                     >  2:1120037/1‑90 (MQ=255)
                                             aGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGAt                                         <  2:2795099/90‑1 (MQ=255)
                                                tCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGc                                      <  1:2784571/90‑1 (MQ=255)
                                                 cTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGcc                                     >  1:378697/1‑90 (MQ=255)
                                                   gAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCaa                                                                               <  1:2778134/46‑1 (MQ=255)
                                                   gAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCaa                                                                               >  2:2778134/1‑46 (MQ=255)
                                                   gAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAAc                                                               <  1:563361/62‑1 (MQ=255)
                                                   gAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAAc                                                               >  2:563361/1‑62 (MQ=255)
                                                   gAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCAc                                   >  2:734461/1‑90 (MQ=255)
                                                    aGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACt                                  <  2:1879008/90‑1 (MQ=255)
                                                    aGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACt                                  <  1:788064/90‑1 (MQ=255)
                                                    aGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACt                                  <  2:2465464/90‑1 (MQ=255)
                                                    aGCCTTTCCGGCATTATTGCTGCTATTACCCGCGTCCCCCCGCCCGGCCCCTGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACt                                  <  1:1236480/90‑1 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGcc                                     >  2:549001/1‑83 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGcc                                     <  1:549001/83‑1 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  2:2176391/1‑90 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  1:421740/1‑90 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  1:1273001/1‑90 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  1:2612273/1‑90 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  1:786115/1‑90 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  1:2134063/1‑90 (MQ=255)
                                                        tttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCg                              >  2:1774077/1‑90 (MQ=255)
                                                         ttCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCgg                             >  1:924624/1‑90 (MQ=255)
                                                          tCCGGCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGgc                            <  1:1606203/90‑1 (MQ=255)
                                                              gCATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCAc                        <  1:2176391/90‑1 (MQ=255)
                                                               cATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACt                       <  2:1632240/90‑1 (MQ=255)
                                                               cATTATTGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACt                       <  2:2752312/90‑1 (MQ=255)
                                                                 ttattGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGa                     <  1:1633152/90‑1 (MQ=255)
                                                                  tattGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGAc                    >  2:2508136/1‑90 (MQ=255)
                                                                   attGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGAcc                   <  2:263954/90‑1 (MQ=255)
                                                                   attGCTGCTATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGAcc                   <  2:1007241/90‑1 (MQ=255)
                                                                      gctgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCAtt                <  1:2328935/90‑1 (MQ=255)
                                                                      gctgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCAtt                <  1:2271768/90‑1 (MQ=255)
                                                                      gctgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCAtt                <  1:553366/90‑1 (MQ=255)
                                                                      gctgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCAtt                <  2:1273001/90‑1 (MQ=255)
                                                                        tgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTcc                                             >  1:472126/1‑59 (MQ=255)
                                                                        tgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTcc                                             <  2:472126/59‑1 (MQ=255)
                                                                        tgctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTc              >  2:568394/1‑90 (MQ=255)
                                                                          ctATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTccc            <  1:488570/90‑1 (MQ=255)
                                                                           tATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTcc                                             <  1:1661081/56‑1 (MQ=255)
                                                                           tATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTcc                                             >  2:1661081/1‑56 (MQ=255)
                                                                           tATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCt           <  1:723375/90‑1 (MQ=255)
                                                                           tATTACCGGCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCt           >  1:2218666/1‑90 (MQ=255)
                                                                                   gCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTc                                                          <  2:332804/35‑1 (MQ=255)
                                                                                   gCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTc                                                          >  1:332804/1‑35 (MQ=38)
                                                                                   gCGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTg                      <  1:2739092/71‑1 (MQ=255)
                                                                                    cGTCCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCTTGTTGTTAc  <  2:90422/90‑1 (MQ=255)
                                                                                       |                                                                                      
GGCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTTCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCTTGTTGTTAC  >  NZ_CP009273/1877729‑1877902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑