Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 2,410,868 A→T G103G (GGA→GGT yfcC → putative basic amino acid antiporter YfcC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092732,410,8680AT99.2% 450.5 / NA 118G103G (GGA→GGTyfcCputative basic amino acid antiporter YfcC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (60/56);  minor base C (1/0);  total (62/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 118 total aligned reads displayed.

ACCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGATCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCAT  >  NZ_CP009273/2410781‑2410954
                                                                                       |                                                                                      
aCCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTc                                                                                      <  1:2761601/90‑1 (MQ=255)
aCCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTc                                                                                      >  2:2777196/1‑90 (MQ=255)
aCCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTc                                                                                      >  2:332670/1‑90 (MQ=255)
  cTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGa                                                                                    <  2:922902/90‑1 (MQ=255)
   tGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGaa                                                                                   >  2:2796199/1‑90 (MQ=255)
    gAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGaaa                                                                                  >  2:242079/1‑90 (MQ=255)
     aGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAAt                                                                                 <  2:1411325/90‑1 (MQ=255)
     aGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAAt                                                                                 >  2:1429190/1‑90 (MQ=255)
     aGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAAt                                                                                 >  2:2754369/1‑90 (MQ=255)
       tATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATAc                                                                               <  2:894812/90‑1 (MQ=255)
       tATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATAc                                                                               <  2:2315363/90‑1 (MQ=255)
         tCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACgg                                                                             >  2:1267877/1‑90 (MQ=255)
         tCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACgg                                                                             >  2:1701240/1‑90 (MQ=255)
              gcgTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATAc                                                                               >  2:2198736/1‑83 (MQ=255)
              gcgTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAg                                                                        >  2:1181277/1‑90 (MQ=255)
              gcgTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAg                                                                        >  1:2011363/1‑90 (MQ=255)
              gcgTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAg                                                                        >  2:790059/1‑90 (MQ=255)
              gcgTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAg                                                                        >  2:747158/1‑90 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGTACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGcc                                                                      >  1:1689753/1‑90 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGcc                                                                      >  2:468019/1‑90 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGcc                                                                      >  2:925726/1‑90 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGcc                                                                      >  1:2126688/1‑90 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGcc                                                                      >  1:2913099/1‑90 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCACGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGc                                                                       <  2:1877905/89‑1 (MQ=255)
                gTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCACGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGc                                                                       >  1:1877905/1‑89 (MQ=255)
                  aCAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGt                                                                    <  1:1862641/90‑1 (MQ=255)
                   cAGCTGTTCACGCCGGGCGATGACCGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGtt                                                                   <  1:2609948/90‑1 (MQ=255)
                   cAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGtt                                                                   <  2:551414/90‑1 (MQ=255)
                   cAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGtt                                                                   <  2:1371105/90‑1 (MQ=255)
                     gCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTgg                                                                 >  2:2931866/1‑90 (MQ=255)
                      cTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGc                                                                <  2:479299/90‑1 (MQ=255)
                      cTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGc                                                                >  1:1068567/1‑90 (MQ=255)
                       tGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGca                                                               <  1:1004522/90‑1 (MQ=255)
                       tGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGca                                                               <  2:1961391/90‑1 (MQ=255)
                       tGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGca                                                               <  1:2193619/90‑1 (MQ=255)
                        gTTCACGCCGGGCGATGCACGCCCGGGCCTGATGACCTTCCGGTTTGAAGGATTAACCTCAGGCTCGAAATACGGGACCGCCGGTGGcat                                                              >  1:1100414/1‑90 (MQ=255)
                        gTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcat                                                              <  1:242079/90‑1 (MQ=255)
                        gTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcat                                                              >  1:2261077/1‑90 (MQ=255)
                        gTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcat                                                              >  1:1729422/1‑90 (MQ=255)
                        gTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcat                                                              >  1:2113953/1‑90 (MQ=255)
                          tCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatca                                                            >  1:442049/1‑90 (MQ=255)
                          tCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatca                                                            >  1:1597371/1‑90 (MQ=255)
                          tCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatca                                                            >  1:1243555/1‑90 (MQ=255)
                          tCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatca                                                            >  2:488464/1‑90 (MQ=255)
                            acgacgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatcatc                                                          <  2:1597371/90‑1 (MQ=255)
                            acgacgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatcatc                                                          <  1:1056049/90‑1 (MQ=255)
                            acgacgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGcatcatc                                                          <  1:349895/90‑1 (MQ=255)
                             cgacgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGAc                                                                          <  1:3006989/73‑1 (MQ=255)
                             cgacgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGAc                                                                          >  2:3006989/1‑73 (MQ=255)
                               acgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATg                                                       >  1:2457559/1‑90 (MQ=255)
                               acgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATg                                                       <  2:2359134/90‑1 (MQ=255)
                               acgGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATg                                                       >  2:2376502/1‑90 (MQ=255)
                                  ggCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGa                                                                                    <  1:2101697/58‑1 (MQ=255)
                                  ggCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGa                                                                                    >  2:2101697/1‑58 (MQ=255)
                                  ggCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGttt                                                    >  2:621298/1‑90 (MQ=255)
                                     gATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATg                                                 <  2:798136/90‑1 (MQ=255)
                                       tGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCt                                               >  2:2875069/1‑90 (MQ=255)
                                         aaCGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTgg                                             >  2:567366/1‑90 (MQ=255)
                                           cGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTg                                           >  2:2207043/1‑90 (MQ=255)
                                            gCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCt                                               >  1:507284/1‑85 (MQ=255)
                                            gCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCt                                               <  2:507284/85‑1 (MQ=255)
                                            gCCCGGGCCTGATGAACTTCCCGTTAGAGGGATTAACCTCAGGGTCGAAAGACGGGACAGCCGTTGGGATCATCATGCTTATGCCGGtct                                          >  1:2643355/1‑88 (MQ=255)
                                                gggCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTgg                                      >  1:2537027/1‑90 (MQ=255)
                                                   ccTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTggcgg                                   <  1:904173/90‑1 (MQ=255)
                                                    cTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTggcggc                                  <  1:1422516/90‑1 (MQ=255)
                                                     tgatgaACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGgcggcg                                 >  1:226880/1‑90 (MQ=255)
                                                      gatgaACTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGgcgc                                >  2:2058104/1‑90 (MQ=255)
                                                          aaCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGttt                            <  2:2913099/90‑1 (MQ=255)
                                                          aaCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGttt                            <  2:2126688/90‑1 (MQ=255)
                                                          aaCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGttt                            <  1:1283805/90‑1 (MQ=255)
                                                           aCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATg                                                       >  2:245672/1‑62 (MQ=255)
                                                           aCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTg                           >  1:1502902/1‑90 (MQ=255)
                                                           aCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTg                           >  2:258725/1‑90 (MQ=255)
                                                           aCTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTg                           >  1:777737/1‑90 (MQ=255)
                                                            cTTCCCGTTTGAAGGTTTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTgg                          <  2:959875/90‑1 (MQ=255)
                                                            cTTCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTgg                          <  2:2849603/90‑1 (MQ=255)
                                                              tCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTggcgg                                   >  1:1445586/1‑79 (MQ=255)
                                                              tCCCGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTggcgg                                   <  2:1445586/79‑1 (MQ=255)
                                                               cccGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCAt                       <  1:1429190/90‑1 (MQ=255)
                                                               cccGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCAt                       <  2:2784939/90‑1 (MQ=255)
                                                                ccGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCAtt                      >  2:921441/1‑90 (MQ=255)
                                                                 cGTTTGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATtg                     <  1:2384419/90‑1 (MQ=255)
                                                                    ttGAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGa                  <  2:1983939/90‑1 (MQ=255)
                                                                      gAAGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGTGCGTTTGGCATTGTGATg                <  1:1701240/90‑1 (MQ=255)
                                                                       aaGGATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGc               <  1:921441/90‑1 (MQ=255)
                                                                          gATTAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTa            >  2:133725/1‑90 (MQ=255)
                                                                            ttAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACa          <  2:2178441/90‑1 (MQ=255)
                                                                            ttAACCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACa          <  2:2011363/90‑1 (MQ=255)
                                                                               aCCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGa       <  1:488464/90‑1 (MQ=255)
                                                                               aCCTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGa       <  2:1729422/90‑1 (MQ=255)
                                                                                ccTCAGGTTCGAAATACGGGACAGCCGTTGGcatcatc                                                          <  1:2808810/38‑1 (MQ=38)
                                                                                ccTCAGGTTCGAAATACGGGACAGCCGTTGGcatcatc                                                          >  2:2808810/1‑38 (MQ=255)
                                                                                 cTCAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAAc     <  1:621298/90‑1 (MQ=255)
                                                                                   cAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATtgtg                   <  1:1096094/74‑1 (MQ=255)
                                                                                   cAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATtgtg                   >  2:1096094/1‑74 (MQ=255)
                                                                                   cAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAgg        >  1:529012/1‑85 (MQ=255)
                                                                                   cAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAgg        <  2:529012/85‑1 (MQ=255)
                                                                                   cAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCa   >  1:205270/1‑90 (MQ=255)
                                                                                   cAGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCa   <  2:205270/90‑1 (MQ=255)
                                                                                    aGGTTCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCAt  <  1:2207043/90‑1 (MQ=255)
                                                                                       |                                                                                      
ACCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGATCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCAT  >  NZ_CP009273/2410781‑2410954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: