BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	322,687	A→G	I91T (ATC→ACC)	betA ←	choline dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	322,687	0	A	G	100.0%	423.9 / NA	112	I91T (ATC→ACC)	betA	choline dehydrogenase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (54/58); total (54/58)

Only 100 of 112 total aligned reads displayed.

TCGAGGTAGCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGATCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCATAGGC  >  NZ_CP009273/322600‑322772

tCGAGGTAGCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTc                                                                                     >  2:1279027/1‑90 (MQ=255)

tCGAGGTAGCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTc                                                                                     <  2:37636/90‑1 (MQ=255)

 cGAGGTAGCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCa                                                                                    >  2:1571697/1‑90 (MQ=255)

       aGCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGcgacg                                                                              >  1:2362686/1‑90 (MQ=255)

        gCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGcgacga                                                                             >  2:2884488/1‑90 (MQ=255)

         cTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGAt                                                                            >  2:378032/1‑90 (MQ=255)

         cTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGAt                                                                            <  1:1179233/90‑1 (MQ=255)

         cTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGAt                                                                            >  1:2844843/1‑90 (MQ=255)

         cTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGAt                                                                            <  1:591713/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  2:2545597/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:1848807/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:1686543/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:845530/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:2884488/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  2:2868923/90‑1 (MQ=255)

          tCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:1187087/90‑1 (MQ=255)

             aGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCAc                                                                        >  2:2130729/1‑90 (MQ=255)

             aGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCAc                                                                        >  2:748377/1‑90 (MQ=255)

               ttCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCCCATGCCGTTGGTCAGCGACGATCCAccc                                                                      <  1:1783749/90‑1 (MQ=255)

               ttCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCAccc                                                                      <  1:647218/90‑1 (MQ=255)

               ttCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCAccc                                                                      <  1:761267/90‑1 (MQ=255)

               ttCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCAccc                                                                      <  1:471423/90‑1 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    <  1:64541/90‑1 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    >  1:2828141/1‑90 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    <  2:852775/90‑1 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    <  1:929866/90‑1 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    <  2:1726389/90‑1 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    <  2:2007000/90‑1 (MQ=255)

                 ctcCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAg                                                                    <  2:2155721/90‑1 (MQ=255)

                   ccAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           >  2:2700529/1‑81 (MQ=255)

                   ccAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:2700529/81‑1 (MQ=255)

                        ccGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTa                                                             >  1:971089/1‑90 (MQ=255)

                          gggTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGGGACGATCCACCCAGACCTTTAcc                                                           >  1:2540006/1‑90 (MQ=255)

                          gggTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTAcc                                                           >  2:968645/1‑90 (MQ=255)

                          gggTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTAcc                                                           <  1:278563/90‑1 (MQ=255)

                          gggTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTAcc                                                           <  1:2130729/90‑1 (MQ=255)

                          gggTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTAcc                                                           >  1:2312887/1‑90 (MQ=255)

                           ggTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcg                                                          >  1:1085427/1‑90 (MQ=255)

                            gTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcgc                                                         <  1:2497048/90‑1 (MQ=255)

                            gTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcgc                                                         <  1:1091960/90‑1 (MQ=255)

                            gTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcgc                                                         <  1:1571697/90‑1 (MQ=255)

                            gTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcgc                                                         <  2:61991/90‑1 (MQ=255)

                                ttGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGcga                                                                                <  1:2705232/63‑1 (MQ=255)

                                ttGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGcga                                                                                >  2:2705232/1‑63 (MQ=255)

                                ttGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTcc                                                     >  1:2242452/1‑90 (MQ=255)

                                ttGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTcc                                                     <  1:1942046/90‑1 (MQ=255)

                                 tGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCg                                                    <  1:904913/90‑1 (MQ=255)

                                  gcgcCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGcga                                                                                <  1:702347/61‑1 (MQ=255)

                                  gcgcCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGcga                                                                                >  2:702347/1‑61 (MQ=255)

                                   cgcCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCa                                                  <  1:1191772/90‑1 (MQ=255)

                                   cgcCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCa                                                  <  2:581246/90‑1 (MQ=255)

                                    gcCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCAc                                                 <  2:2844843/90‑1 (MQ=255)

                                    gcCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCAc                                                 >  2:2273978/1‑90 (MQ=255)

                                      ccAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTc                                               <  2:235863/90‑1 (MQ=255)

                                         gTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCAt                                            >  2:2402328/1‑90 (MQ=255)

                                            aTCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATgcg                                         <  2:1124842/90‑1 (MQ=255)

                                              cGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATgcggc                                       <  2:2371325/90‑1 (MQ=255)

                                              cGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATgcggc                                       <  1:1016030/90‑1 (MQ=255)

                                                 gaTCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGt                                    >  2:2207250/1‑90 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           <  1:1468776/49‑1 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATc                                                                           >  2:1468776/1‑49 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTa                                  >  2:517124/1‑90 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTa                                  >  1:2642865/1‑90 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTa                                  >  2:964149/1‑90 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTa                                  >  1:365557/1‑90 (MQ=255)

                                                   tCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGGTa                                  >  1:1259850/1‑90 (MQ=255)

                                                      aGCGCATTGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGGTATTc                               >  1:1716833/1‑90 (MQ=255)

                                                            ttGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAAc                         >  2:1487245/1‑90 (MQ=255)

                                                            ttGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAAc                         >  2:330676/1‑90 (MQ=255)

                                                            ttGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAAc                         >  1:679235/1‑90 (MQ=255)

                                                            ttGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAAc                         <  1:2402328/90‑1 (MQ=255)

                                                             tGCCACGGATGTAGCCCATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACg                        <  2:2540006/90‑1 (MQ=255)

                                                             tGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACg                        <  1:968645/90‑1 (MQ=255)

                                                             tGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACg                        <  1:1381289/90‑1 (MQ=255)

                                                             tGCCACGGATGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACg                        <  1:330676/90‑1 (MQ=255)

                                                                     aTGTAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGt                <  2:1146961/90‑1 (MQ=255)

                                                                        tAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTcc             >  1:1652257/1‑90 (MQ=255)

                                                                        tAGCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGGTCAGGGTcc             >  1:2276535/1‑90 (MQ=255)

                                                                          gCACATGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGt           <  2:1259850/90‑1 (MQ=255)

                                                                            acaTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGttt         >  2:2559391/1‑90 (MQ=255)

                                                                             caTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTc        >  1:132074/1‑90 (MQ=255)

                                                                             caTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTc        >  2:897075/1‑90 (MQ=255)

                                                                             caTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGGTCCGTTTc        >  1:2149812/1‑90 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcgc                                                         >  2:2226336/1‑40 (MQ=39)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACcgc                                                         <  1:2226336/40‑1 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCa                   >  2:1827113/1‑78 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCCGGGTCCGTTTCa       >  1:2607870/1‑90 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCa       >  2:764113/1‑90 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCa       >  2:1570220/1‑90 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCa       >  2:1987595/1‑90 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGGTCAGGGTCCGTTTCa       >  1:891935/1‑90 (MQ=255)

                                                                              aTGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGGTATTCATAAACGGGTCAGGGTCCGGTTCa       >  1:2410619/1‑90 (MQ=255)

                                                                               tGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCAt      <  1:1116430/90‑1 (MQ=255)

                                                                               tGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCAt      >  1:891067/1‑90 (MQ=255)

                                                                               tGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCAt      >  2:1050670/1‑90 (MQ=255)

                                                                               tGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCAt      >  2:1301611/1‑90 (MQ=255)

                                                                               tGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGGTCCGTTTCAt      >  1:1146111/1‑90 (MQ=255)

                                                                               tGCCGTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGGTCAGGGTCCGGTTCAt      >  1:2615669/1‑90 (MQ=255)

                                                                                   gTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCATAGGc  <  1:546519/90‑1 (MQ=255)

                                                                                   gTTGGTCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCATAGGc  >  1:214944/1‑90 (MQ=255)

TCGAGGTAGCTCCAGTTCTCCAGACCGGGTTCTTGCGCCCAGTTATCGAGATCCAGCGCATTGCCACGGATGTAGCACATGCCGTTGATCAGCGACGATCCACCCAGACCTTTACCGCGTCCGCACTCCATGCGGCGGTTATTCATAAACGGTTCAGGTTCCGTTTCATAGGC  >  NZ_CP009273/322600‑322772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`