BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	4,306,692	A→T	I115N (ATC→AAC)	phnM ←	alpha‑D‑ribose 1‑methylphosphonate 5‑triphosphate diphosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	4,306,692	0	A	T	100.0%	359.0 / NA	92	I115N (ATC→AAC)	phnM	alpha‑D‑ribose 1‑methylphosphonate 5‑triphosphate diphosphatase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (53/39); total (53/39)

Only 100 of 101 total aligned reads displayed.

GTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCGCT  >  NZ_CP009273/4306605‑4306777

gtggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttc                                                                                     >  1:1080218/1‑90 (MQ=255)

gtggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttc                                                                                     >  2:1736115/1‑90 (MQ=255)

  ggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttcat                                                                                   >  1:1944753/1‑90 (MQ=255)

   gtgtGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttcctc                                                                                  <  2:2752600/90‑1 (MQ=255)

   gtgtGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttcatc                                                                                  <  2:2388093/90‑1 (MQ=255)

   gtgtGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttcatc                                                                                  <  2:1397050/90‑1 (MQ=255)

   gtgtGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttcatc                                                                                  <  1:1499381/90‑1 (MQ=255)

   gtgtGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGttcatc                                                                                  <  2:770294/90‑1 (MQ=255)

    tgtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCAtct                                                                                 <  1:869653/90‑1 (MQ=255)

        aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             >  2:2216837/1‑90 (MQ=255)

        aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             <  2:1944753/90‑1 (MQ=255)

        aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             >  2:1019719/1‑90 (MQ=255)

        aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             >  2:1004561/1‑90 (MQ=255)

        aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             >  1:2119495/1‑90 (MQ=255)

          gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCa                                                                           >  1:911788/1‑90 (MQ=255)

          gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCa                                                                           >  2:432088/1‑90 (MQ=255)

           cGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAg                                                                          <  2:2300964/90‑1 (MQ=255)

            ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGa                                                                         >  1:2205025/1‑90 (MQ=255)

             gCAGTTCGCAGCGCAGATGCAGGCGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGAt                                                                        <  1:1627309/90‑1 (MQ=255)

             gCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGAt                                                                        <  1:402587/90‑1 (MQ=255)

             gCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGAt                                                                        >  2:2429072/1‑90 (MQ=255)

             gCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGAt                                                                        >  1:1296339/1‑90 (MQ=255)

                  tCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTcc                                                                   >  1:2063780/1‑90 (MQ=255)

                            gATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATcgc                                                         >  2:476643/1‑90 (MQ=255)

                              tGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATcgccg                                                       <  1:2329294/90‑1 (MQ=255)

                               gCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATcgccgc                                                      <  2:2205025/90‑1 (MQ=255)

                               gCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATcgccgc                                                      >  2:250278/1‑90 (MQ=255)

                               gCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAGGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATcgccgc                                                      >  1:1522500/1‑90 (MQ=255)

                                 aGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGccgccg                                                    >  2:2504772/1‑90 (MQ=255)

                                 aGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGccgccg                                                    >  2:281742/1‑90 (MQ=255)

                                 aGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGccgccg                                                    >  2:146805/1‑90 (MQ=255)

                                 aGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGccgccg                                                    >  1:2259861/1‑90 (MQ=255)

                                 aGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGccgccg                                                    >  2:799866/1‑90 (MQ=255)

                                    cGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTcg                                                 >  1:1056639/1‑90 (MQ=255)

                                      gTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGCTCGCCGCCGTcgcg                                               >  1:1243923/1‑90 (MQ=255)

                                      gTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTcgcg                                               >  2:276434/1‑90 (MQ=255)

                                      gTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTcgcg                                               >  2:2649251/1‑90 (MQ=255)

                                      gTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTcgcg                                               >  2:2691090/1‑90 (MQ=255)

                                      gTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTcgcg                                               >  1:720244/1‑90 (MQ=255)

                                      gTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTcgcg                                               >  2:645333/1‑90 (MQ=255)

                                        gCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCa                                             >  1:1325061/1‑90 (MQ=255)

                                          tCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACg                                           >  2:1540805/1‑90 (MQ=255)

                                          tCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCCCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACg                                           <  1:1748501/90‑1 (MQ=255)

                                             gcgcGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAg                                                                          >  2:2586060/1‑56 (MQ=255)

                                             gcgcGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAg                                                                          <  1:2586060/56‑1 (MQ=255)

                                                cgGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGAt                                                                        >  2:2633573/1‑55 (MQ=255)

                                                cgGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGAt                                                                        <  1:2633573/55‑1 (MQ=255)

                                                cgGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCa                                     >  2:2817463/1‑90 (MQ=255)

                                                cgGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCa                                     >  2:2466149/1‑90 (MQ=255)

                                                       cgccgcGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCa                              >  1:1714283/1‑90 (MQ=255)

                                                       cgccgcGTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCa                              <  1:645333/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:276434/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           >  1:2750516/1‑90 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:799866/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           >  1:596952/1‑90 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:1821308/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  2:1325061/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:281742/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  2:2977038/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  2:320163/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:2216837/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCCCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:2862464/90‑1 (MQ=255)

                                                          cgcgTTTCTGCGCCTCTTCGATGGCGTTGTTCATCTTCCCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:1587861/90‑1 (MQ=255)

                                                           gcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  2:1519624/89‑1 (MQ=255)

                                                           gcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           >  1:1519624/1‑89 (MQ=255)

                                                           gcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGc                          >  2:348148/1‑90 (MQ=255)

                                                           gcgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGc                          >  1:544115/1‑90 (MQ=255)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             <  1:688817/38‑1 (MQ=38)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTtctc                                                                             >  2:688817/1‑38 (MQ=255)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           >  2:914967/1‑88 (MQ=255)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACgg                           <  1:914967/88‑1 (MQ=255)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCa                         >  2:1958864/1‑90 (MQ=255)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCa                         >  2:1041818/1‑90 (MQ=255)

                                                            cgTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCa                         >  2:364003/1‑90 (MQ=255)

                                                             gTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCAt                        <  2:2347847/90‑1 (MQ=255)

                                                             gTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCAt                        <  2:2225174/90‑1 (MQ=255)

                                                             gTTTCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCAt                        <  2:166064/90‑1 (MQ=255)

                                                               ttCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATcc                      <  2:598883/90‑1 (MQ=255)

                                                               ttCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATcc                      <  2:2259861/90‑1 (MQ=255)

                                                               ttCTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATcc                      <  1:1195524/90‑1 (MQ=255)

                                                                 cTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATTGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAg                    <  2:2709590/90‑1 (MQ=255)

                                                                 cTGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGTCAATTGCCACGGCATCCAg                    <  2:217297/90‑1 (MQ=255)

                                                                  tGCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGt                   <  1:2362070/90‑1 (MQ=255)

                                                                   gCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTa                  >  1:2006980/1‑90 (MQ=255)

                                                                   gCGTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTa                  <  1:1958864/90‑1 (MQ=255)

                                                                     gTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCAt                        <  1:814975/82‑1 (MQ=255)

                                                                     gTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCAt                        >  2:814975/1‑82 (MQ=255)

                                                                     gTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACg                <  1:2022268/90‑1 (MQ=255)

                                                                     gTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACg                >  2:2003271/1‑90 (MQ=255)

                                                                     gTCTCTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACg                >  2:686557/1‑90 (MQ=255)

                                                                      tctcTTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACgg               <  1:2003271/90‑1 (MQ=255)

                                                                       ctctTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACggt              <  1:1915471/90‑1 (MQ=255)

                                                                        tctTCGATGGCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACggtg             >  2:1905603/1‑90 (MQ=255)

                                                                             gATGGCGTTGTTCATCTTCTCCAGATTCTCCAACCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCGCGGCATCCAGTACGGTGGTGAt        >  1:2274849/1‑90 (MQ=255)

                                                                                 gCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCg    >  1:1157415/1‑90 (MQ=255)

                                                                                 gCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCg    >  1:2491874/1‑90 (MQ=255)

                                                                                 gCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCg    >  1:2706576/1‑90 (MQ=255)

                                                                                 gCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCg    <  1:647050/90‑1 (MQ=255)

                                                                                 gCGTTGTTCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCg    >  1:911899/1‑90 (MQ=255)

                                                                                   gttgttCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCGCt  <  1:253631/90‑1 (MQ=255)

GTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCTTCTCCAGATTCTCCAGCCGATCGCCGCCGTCGCGCACGTCGCCAATTGCCACGGCATCCAGTACGGTGGTGATGCCGCT  >  NZ_CP009273/4306605‑4306777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`