Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 661,892 A→C G594G (GGT→GGG mrdA ← peptidoglycan DD‑transpeptidase MrdA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP009273661,8920AC99.0% 382.3 / ‑4.5 101G594G (GGT→GGGmrdApeptidoglycan DD‑transpeptidase MrdA
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base C (58/42);  total (59/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 103 total aligned reads displayed.

CCGCAGGCAGATCGGTGTTGTTATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCACCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCACGTAAACG  >  NZ_CP009273/661807‑661975
                                                                                     |                                                                                   
ccGCAGGCAGATCGGTGTTGTTATCCCCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 <  1:1638027/90‑1 (MQ=255)
ccGCAGGCAGATCGGTGTTGTTATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 <  2:2815436/90‑1 (MQ=255)
ccGCAGGCAGATCGGTGTTGTTATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 <  2:1630796/90‑1 (MQ=255)
ccGCAGGCAGATCGGTGTTGTTATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 <  2:626495/90‑1 (MQ=255)
ccGCAGGCAGATCGGTGTTGTTATCACCCAGCATAATGCGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 <  2:2733719/90‑1 (MQ=255)
ccGCAGGCAGATCGGTGTTGTTACCCCCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCACCCGCCGGACCCGCACCCCCGt                                                                                 <  1:2126179/90‑1 (MQ=255)
       cagATCGGTGTTGTTATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAg                                                                          <  2:1766875/90‑1 (MQ=255)
                   gttATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGAc                                                              >  2:1394911/1‑90 (MQ=255)
                   gttATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGAc                                                              >  1:1090338/1‑90 (MQ=255)
                     tATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAg                                                            >  1:657366/1‑90 (MQ=255)
                     tATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAg                                                            >  2:799758/1‑90 (MQ=255)
                     tATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAg                                                            >  1:183615/1‑90 (MQ=255)
                       tCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGcc                                                          <  1:183498/90‑1 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  1:2591176/1‑90 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  2:2218556/1‑90 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  1:227286/1‑90 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  1:332692/1‑90 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  1:1834268/1‑90 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  2:1183140/1‑90 (MQ=255)
                        cACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCa                                                         >  2:1145683/1‑90 (MQ=255)
                            cAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTg                                                     <  2:2135078/90‑1 (MQ=255)
                             aGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGc                                                    >  2:39674/1‑90 (MQ=255)
                              gCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCg                                                   >  2:2669631/1‑90 (MQ=255)
                               cATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCgg                                                  <  2:1943297/90‑1 (MQ=255)
                                 tAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGAt                                                <  2:2932902/90‑1 (MQ=255)
                                  aaTGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGAtt                                               >  2:2076361/1‑90 (MQ=255)
                                   aTGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGAc                                                              >  2:1809793/1‑74 (MQ=255)
                                   aTGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGAc                                                              <  1:1809793/74‑1 (MQ=255)
                                   aTGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGAttg                                              >  2:1115807/1‑90 (MQ=255)
                                   aTGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGAttg                                              >  2:2639620/1‑90 (MQ=255)
                                    tgtgGTCGAGGATCTGGCGCATCAGTGTCCCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGAttgt                                             <  1:660179/90‑1 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 >  1:27761/1‑50 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGt                                                                                 <  2:27761/50‑1 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTtc                                                                               >  2:60130/1‑52 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTtc                                                                               <  1:60130/52‑1 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGa                                                 >  2:648072/1‑82 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGa                                                 <  1:648072/82‑1 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:1822563/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:693234/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:1511544/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:2523585/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:2091175/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:2703731/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  1:24324/1‑90 (MQ=255)
                                        gTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCACCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTa                                         >  2:265603/1‑90 (MQ=255)
                                         tCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTAt                                        <  2:693234/90‑1 (MQ=255)
                                         tCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTAt                                        <  2:1412170/90‑1 (MQ=255)
                                         tCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTAt                                        <  1:2669631/90‑1 (MQ=255)
                                         tCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTAt                                        <  2:2065966/90‑1 (MQ=255)
                                         ccGAGGATCTGGCGCATCAGTGTCCCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTAt                                        <  2:1755016/89‑1 (MQ=255)
                                             ggATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGgcg                                    >  2:3002164/1‑90 (MQ=255)
                                               aTCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCa                                  >  1:851859/1‑90 (MQ=255)
                                               aTCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCa                                  >  1:1243963/1‑90 (MQ=255)
                                                 cTGGCGCATCAGTGTCCCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCaaa                                <  2:1943136/90‑1 (MQ=255)
                                                 cTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCaaa                                <  2:227286/90‑1 (MQ=255)
                                                 cTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCaaa                                <  1:851569/90‑1 (MQ=255)
                                                  tGGCGCATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAg                               >  2:2648952/1‑90 (MQ=255)
                                                   ggCGCATCAGTGTCCCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAgg                              <  1:90511/90‑1 (MQ=255)
                                                      gcATCAGTGTACCAACCGCCGGACCCGCCCCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCgg                           <  2:2091175/90‑1 (MQ=255)
                                                       cATCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGt                          <  1:2779300/90‑1 (MQ=255)
                                                        aTCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGaa                                                                        <  2:1971347/43‑1 (MQ=255)
                                                        aTCAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGaa                                                                        >  1:1971347/1‑43 (MQ=255)
                                                          cAGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcat                       <  1:1394911/90‑1 (MQ=255)
                                                           aGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatc                      <  1:1847582/90‑1 (MQ=255)
                                                           aGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatc                      <  2:203617/90‑1 (MQ=255)
                                                           aGTGTACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatc                      <  1:2076361/90‑1 (MQ=255)
                                                            gtgtACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatca                     <  1:950073/90‑1 (MQ=255)
                                                              gtACCAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGt                   >  1:2515627/1‑90 (MQ=255)
                                                                 ccAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtg                >  1:3003146/1‑90 (MQ=255)
                                                                 ccAACCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtg                >  1:2430248/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatc                      >  1:1068846/1‑82 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatc                      <  2:1068846/82‑1 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  2:846515/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  1:1814610/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  2:301901/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  2:373970/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  1:1471564/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  1:2392254/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  2:1930121/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  1:556299/1‑90 (MQ=255)
                                                                   aaCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTtgtg              >  1:375899/1‑90 (MQ=255)
                                                                    aCCGCCGGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTgg             >  2:1381181/1‑90 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATTATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTc           <  2:1834268/90‑1 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCgg                                                  >  1:2491495/1‑51 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCgg                                                  <  2:2491495/51‑1 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTAt                                        >  1:889049/1‑61 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTc           <  1:1366455/90‑1 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTc           <  1:2648952/90‑1 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTc           >  2:774433/1‑90 (MQ=255)
                                                                      cgccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTc           <  1:2587003/90‑1 (MQ=255)
                                                                        ccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCAc         >  1:535391/1‑90 (MQ=255)
                                                                        ccgGACCCGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCAc         >  1:1228971/1‑90 (MQ=255)
                                                                          ggACCCGCACCCCCGTTCTCCAGAATCATGGCGAc                                                              >  1:699743/1‑35 (MQ=37)
                                                                          ggACCCGCACCCCCGTTCTCCAGAATCATGGCGAc                                                              <  2:699743/35‑1 (MQ=37)
                                                                               cGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGtcatc                      >  1:1923893/1‑70 (MQ=255)
                                                                               cGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCACGTAAACg  >  2:2676238/1‑90 (MQ=255)
                                                                               cGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCACGTAAACg  >  1:651375/1‑90 (MQ=255)
                                                                               cGCACCCCCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCACGTAAACg  >  1:1337552/1‑90 (MQ=255)
                                                                                 caccccCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCgg                           >  2:1817760/1‑63 (MQ=255)
                                                                                 caccccCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCgg                           <  1:1817760/63‑1 (MQ=255)
                                                                                     |                                                                                   
CCGCAGGCAGATCGGTGTTGTTATCACCCAGCATAATGTGGTCGAGGATCTGGCGCATCAGTGTACCAACCGCCGGACCCGCACCACCGTTCTCCAGAATCATGGCGACAGCCACTTGCGGATTGTTGTATGGCGCAAAGGCGGTCATCAGTTTGTGGTCACGTAAACG  >  NZ_CP009273/661807‑661975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: