| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 56,392 | A→C | Y240D (TAC→GAC) | lptD ← | LPS assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 56,392 | 0 | A | C | 98.4% | 384.8 / NA | 128 | Y240D (TAC→GAC) | lptD | LPS assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (65/61); minor base T (1/1); total (66/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTAGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGCTATAAA > NZ_CP009273/56306‑56478 | gCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGtt < 1:2337478/90‑1 (MQ=255)gCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGtt < 2:2632695/90‑1 (MQ=255) acgacgATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggt < 2:1710503/90‑1 (MQ=255) acgacgATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggt < 1:482003/90‑1 (MQ=255) acgacgATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggt < 2:1023592/90‑1 (MQ=255) acgacgATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggt < 1:1199270/90‑1 (MQ=255) cgacgaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtg > 2:890547/1‑90 (MQ=255) gacgaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtgg < 1:2206098/90‑1 (MQ=255) gacgaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtgg < 2:2214562/90‑1 (MQ=255) gacgaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtgg < 1:2099603/90‑1 (MQ=255) gacgaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGGACTCAAAGTCGTtggggg > 1:2768926/1‑90 (MQ=255) acgaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtggt < 1:735640/90‑1 (MQ=255) gaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtggtgg < 2:2509346/90‑1 (MQ=255) gaTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTtggtggtgg < 1:2095555/90‑1 (MQ=255) aTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTtggtggtggg > 2:63301/1‑89 (MQ=255) aTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTtggtgggggg > 2:520526/1‑89 (MQ=255) aTGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGGCGTTGGGGGGGGTGTACTTTGc > 2:2842793/1‑90 (MQ=255) aTGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAAGTCGTTGGGGGTGGTGTACTTGGc > 1:873699/1‑90 (MQ=255) aTGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAAATCGTTGGGGGGGGGGGACTTggg > 1:138169/1‑89 (MQ=255) tGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGTGGGGGGGTACTTGGCg > 1:2816527/1‑90 (MQ=255) cggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGGGGTGTACTTGGCGtt > 2:1097370/1‑90 (MQ=255) cggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAATCGTTGGGGGGGGGGTACTTGGCGtt > 2:2211881/1‑90 (MQ=255) cggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAAGCGTTAGGGGTGGGGTACTTTGGGtt > 2:2299977/1‑90 (MQ=255) ggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTc > 2:1544349/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGtt < 1:1814703/67‑1 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGtt > 2:1814703/1‑67 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCg > 2:1136478/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCg > 2:988698/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCg > 2:414210/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGGGGTGTACTTGGCGTTCg > 2:101927/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGTGGTGGGGTACTTTGGGTTCg > 1:3013727/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGGGGGGGGGTACTTTGCGTTCg > 1:2581638/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAAGTCGTTGGGGGTGGGGTACTTGGCGTTCg > 1:1087119/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAAATCGTTGGTGGGGGTGTACTTGGCGTTCg > 2:2365561/1‑90 (MQ=255) gcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAAAACGTTGGGGGTGGGGTACTTGGCGTTCg > 1:686761/1‑90 (MQ=255) gTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCggg < 1:733404/90‑1 (MQ=255) tGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGa < 2:1873327/90‑1 (MQ=255) aTGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATc < 2:1513092/90‑1 (MQ=255) aTGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATc < 1:1996297/90‑1 (MQ=255) tggCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTTGGGGGGGGTGTACTTGGCGTTCGGGGTCAAGa > 1:2727967/1‑90 (MQ=255) ggCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGaa < 2:2587586/90‑1 (MQ=255) ggCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGGCGTTGGTGGTGGGGGACTTGGGGTTCGGGGTCAaaaa > 2:1817721/1‑90 (MQ=255) ggCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGGGGGGGGGTACTTGGGGTTGGGGGTCAAGaa > 1:1358601/1‑90 (MQ=255) cATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGGAATCCAAGTCGTTGGGGGGGGGGGACTTGGCGTTCGGGGTCAAGAAAc > 1:2037394/1‑90 (MQ=255) aTCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAAcc < 1:2107399/90‑1 (MQ=255) aTCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGGGGGGGTGTACTTTGCGGTCGGGATCaaaaaaac > 1:425876/1‑88 (MQ=255) ccATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCag > 2:137635/1‑90 (MQ=255) cATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGGGGGGGGGTACTTGGCGTTCGGGGTCAAAAAAACaga > 1:253565/1‑90 (MQ=255) atatTTGGCGCGATGTTCCAGTAATATGGCAGGGAGGAATCAAAATCGTTGGGGGGGGGGTACTTTGGGTTCGGGGTCAAGAAAACagag > 1:2255333/1‑90 (MQ=255) tatTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGc < 1:924797/90‑1 (MQ=255) tatTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTTGGTGGGGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGc > 2:2976826/1‑90 (MQ=255) tttGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGa < 1:1202183/90‑1 (MQ=255) tttGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGa < 2:1265481/90‑1 (MQ=255) tGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCCAAGTCGTTGGGGGGGGTGTACTTGGCGTTCGGGATTAAGAAACCAGAGCGACg > 2:2107399/1‑90 (MQ=255) tGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACg < 2:2009004/90‑1 (MQ=255) tGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACg < 1:1073991/90‑1 (MQ=255) tGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACg < 1:2299977/90‑1 (MQ=255) tGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTTGGTGGGGGGGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACg > 2:1362845/1‑90 (MQ=255) gcgcGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGtt > 2:492349/1‑90 (MQ=255) gcgcGATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTTGGTGGGGGGGTACTTGGCGTTCGGGGTCAAGAAACCAAAGCGACGtt > 1:293897/1‑90 (MQ=255) gcgcGATGTTCCAGTAATATGGCAGGGAGAACTCAAAATCGTTGGGGGGGGGGTACTTGGGGTTCGGGGTCAAGAAACCAAAGCGACGtt > 1:1453234/1‑90 (MQ=255) cgATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGt < 1:2850554/90‑1 (MQ=255) cgATGTTCCAGTAATATGGCAGGGAGAACTCAAAGGTGTTGGGGGTGGGGTACTTGGCGGTCGGGGGGAAGAAAACAGAGCGAGGttttt > 1:2156425/1‑88 (MQ=255) gATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGGGTTCGGGATCAAGAAACCAGAGCGACGTTTGTc > 2:1509448/1‑90 (MQ=255) gATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTc < 1:2769706/90‑1 (MQ=255) gATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGGGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTc > 2:358897/1‑90 (MQ=255) gATGTTCCAGTAATATGGCAGGGAGAACTCAAAGTCGTTGGGGGGGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTc > 1:777497/1‑90 (MQ=255) tCCAGTAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTcaccca < 1:1552863/90‑1 (MQ=255) tAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGc < 1:1511935/90‑1 (MQ=255) tAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGc < 1:1704556/90‑1 (MQ=255) tAATATGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGc < 2:293897/90‑1 (MQ=255) aaTATGGCAGGGAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGGTCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCa > 1:1131039/1‑90 (MQ=255) atatGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCaa < 2:436918/90‑1 (MQ=255) atatGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCaa < 2:151462/90‑1 (MQ=255) atatGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCaa < 2:1909252/90‑1 (MQ=255) atatGGCAGGCAGAACTCAAAGTCGTTGGTGGTGGTGTGCTTGGCGTTCGGGACCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCaa < 1:2867120/90‑1 (MQ=255) tatGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAAc > 2:263367/1‑90 (MQ=255) tatGGCAGGTAGAACTCAAAATCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCCCCGGCAAc > 2:2364011/1‑90 (MQ=255) tatGGCAGGGAGAACTCAAAGTCGTTGGTGGGGGGGTACTTGGCGTTCGGGGTCAAGAAAACAGAGCGACGTTTGTCACCCACCGGCAAc > 1:1254688/1‑90 (MQ=255) atGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACt < 2:2416688/90‑1 (MQ=255) atGGCAGGTAGAAATCAAAGTCGTTGGTGGGGGGGGACTTGGCGTTCGGGATCAAAAAACCAAAGGGACGGTTGTCACCCACCCGCAACt > 1:2219375/1‑90 (MQ=255) tGGCAGGTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTg < 2:1358601/90‑1 (MQ=255) tGGCAGGGAGGACTCAAAGACGTTGGGGGGGGTGGACTTGGCGTTCGGGGTCAAAAAAACAAAGGGACGGTTGTTACCCACCGGCAACTg > 1:1748614/1‑90 (MQ=255) gggaGAAATCAAAAGCGTTGGTGGGGGTGGACTTTGCGTTCGGGATCAAAAAAACAGAGCGGCGTTTTTCACCCACCCGCCACTGCAAAt > 1:2988861/4‑90 (MQ=255) gTAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATa < 1:999270/90‑1 (MQ=255) ttgAACTCAAAGTTGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAATAAACCAGAGCGACTTTTGTCCCCCACCGGCAACTGCAAATAg < 2:1785713/88‑1 (MQ=255) tAGAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAg < 1:1817721/90‑1 (MQ=255) tAGAACTCAAAGTCGTTGGTGGTGGCGTGATTGGCGTGCGGGCTCAAGAAACCAGAGCGGCGTTTGTCTCCCGCCGGCAACTGCAAATAg < 1:2919537/90‑1 (MQ=255) gAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAggg < 1:1014645/90‑1 (MQ=255) gAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAggg < 1:1544349/90‑1 (MQ=255) gAACTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAggg < 2:2156425/90‑1 (MQ=255) aaCTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAgggg > 2:2071845/1‑90 (MQ=255) aCTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAggg > 1:1956007/1‑88 (MQ=255) aCTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAggg < 2:1956007/88‑1 (MQ=255) aCTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGc < 1:63301/90‑1 (MQ=255) aCTCAAAGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGc < 1:215857/90‑1 (MQ=255) aaGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGCTATaa > 2:1273059/1‑90 (MQ=255) aaGTCGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGCTATaa > 2:777361/1‑90 (MQ=255) agtcgtTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGCTATaaa < 2:1748614/90‑1 (MQ=255) agtcgtTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGCTATaaa < 1:2622831/90‑1 (MQ=255) | GCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAAGTAGTTGGTGGTGGTGTACTTGGCGTTCGGGATCAAGAAACCAGAGCGACGTTTGTCACCCACCGGCAACTGCAAATAGGGGCTATAAA > NZ_CP009273/56306‑56478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |