Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3793530	3793565	36	2 [1]	[1] 4	[waaZ]	[waaZ]

TGACAAAGGTGTTTTTTGCGATGTAGGGCCCGAAAGAAAAATAATAACATCATCAGATATTTTATTTTCAATCAGGTTTTCAACATCTTTTTTGTCAATGTA  >  NZ_CP009273/3793440‑3793541                                                                                          |             tGACAAAGGTGTTTTTTGCGATGTAGGGCCCGAAAGAAAAATAATAACATCATCAGATATTTTATTTTCAATCAGGTTTTCAACATCttt              <  2:111160/90‑1 (MQ=255)             tttttGCGATGTAGGGCCCGAAAGAAAAATAATAACATCATCAGATATTTTATTTTCAATCAGGTTTTCAACATCTTTTTTGTCAATGTa  <  2:253835/90‑1 (MQ=255)                                                                                          |             TGACAAAGGTGTTTTTTGCGATGTAGGGCCCGAAAGAAAAATAATAACATCATCAGATATTTTATTTTCAATCAGGTTTTCAACATCTTTTTTGTCAATGTA  >  NZ_CP009273/3793440‑3793541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑