Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1797629	1797657	29	3 [0]	[0] 2	espL1	type III secretion system effector EspL1

CCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGA  >  NZ_CP009273/1797658‑1797701 |                                            ccTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGa  <  1:221626/44‑1 (MQ=255) ccTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGa  >  2:221626/1‑44 (MQ=255) |                                            CCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGA  >  NZ_CP009273/1797658‑1797701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑