Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	578916	578990	75	2 [1]	[0] 3	BW25113_RS26085/appY	tail fiber assembly protein/DNA‑binding transcriptional activator AppY

TAATCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTATT  >  NZ_CP009273/578991‑579080 |                                                                                          tAATCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTtg                                                <  1:144536/44‑1 (MQ=255) tAATCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTtg                                                >  2:144536/1‑44 (MQ=255) tAATCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTAtt  >  1:374136/1‑90 (MQ=255) |                                                                                          TAATCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTATT  >  NZ_CP009273/578991‑579080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑