Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1046355	1046363	9	2 [1]	[1] 2	BW25113_RS05135/cspH	IS1‑like element IS1D family transposase/cold shock‑like protein CspH

ATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCTGTTGGTCCTC  >  NZ_CP009273/1046361‑1046453    |                                                                                          atgTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCTGTTGGTc     >  2:381301/1‑90 (MQ=255)    ttGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCTGTTGGTCCTc  >  1:214644/1‑90 (MQ=255)    |                                                                                          ATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCTGTTGGTCCTC  >  NZ_CP009273/1046361‑1046453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑