| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,632,437 | (T)7→6 | intergenic (‑71/+8) | BW25113_RS08135 ← / ← BW25113_RS25620 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,632,431 | 0 | T | . | 100.0% | 59.0 / NA | 15 | intergenic (‑65/+14) | BW25113_RS08135/BW25113_RS25620 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (7/8); total (7/8) | |||||||||||
GGATATTCACGCATGATGGTGTTAACTCCAGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGATTTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAATAGACACCAAGCAAAAAAGCTCCCGAAGGA > NZ_CP009273/1632353‑1632502 | ggATATTCACGCATGATGGTGTTAACTCCAGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCatgat < 1:343060/90‑1 (MQ=255)ggATATTCACGCATGATGGTGTTAACTCCAGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCatgat < 2:402953/90‑1 (MQ=255) aCGCATGATGGTGTTAACTCCAGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCgt < 1:65412/90‑1 (MQ=255) cAGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGa > 1:160007/1‑90 (MQ=255) aGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCgt < 1:271493/69‑1 (MQ=255) aGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCgt > 2:271493/1‑69 (MQ=255) gTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAAt > 1:115602/1‑90 (MQ=255) cATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAATAg > 2:295424/1‑90 (MQ=255) ggCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAATAGACACCaa < 2:114788/90‑1 (MQ=255) gctgGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGt < 1:34613/41‑1 (MQ=39) gctgGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGt > 2:34613/1‑41 (MQ=39) gctgGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCgtag > 1:258694/1‑49 (MQ=39) gctgGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCgtag < 2:258694/49‑1 (MQ=39) tgGTTCAGAGTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAATAGACACCAAGCAAAAAAGCTccc > 2:66235/1‑90 (MQ=255) agagTTAAAAAAACTATGA‑TTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAATAGACACCAAGCAAAAAAGCTCCCGAAGGa < 1:244637/90‑1 (MQ=255) | GGATATTCACGCATGATGGTGTTAACTCCAGTCATCGCTGGCACTACCACTGCTGGTTCAGAGTTAAAAAAACTATGATTTTTTTCATGATGTTACCGTAGTATGTGAGTATCCATCGAATAGACACCAAGCAAAAAAGCTCCCGAAGGA > NZ_CP009273/1632353‑1632502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |