Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1129468	1129497	30	2 [1]	[1] 2	flgF	flagellar basal‑body rod protein FlgF

TTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGCAGATATGACGCCCGGCAAAATG  >  NZ_CP009273/1129378‑1129470                                                                                          |    ttACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGCAGATATGACGCCCGGCaaa     >  1:103066/1‑90 (MQ=255)    cgcgcgGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGCAGATATGACGCCCGGCAAAATg  <  1:373481/90‑1 (MQ=255)                                                                                          |    TTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGCAGATATGACGCCCGGCAAAATG  >  NZ_CP009273/1129378‑1129470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑