Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2961087	2961106	20	3 [1]	[0] 3	ptsP	phosphoenolpyruvate‑‑protein phosphotransferase

GAGCCTTTATCAACCTCGGCAAACAATTCGCGACGCAGCCGGGTGTCCGAAAGCAGGTGCGAGTAAAGATCGAAAATAGCCGCCGTTTCTTTTTGTGCACCG  >  NZ_CP009273/2960997‑2961098                                                                                          |             gAGCCTTTATCAACCTCGGCAAACAATTCGCGACGCAGCCGGGTGTCCGAAAGCAGGTGCGAGTAAAGATCGAAAATAGCCGCCGTTTCt              >  1:96575/1‑90 (MQ=255) gAGCCTTTATCAACCTCGGCAAACAATTCGCGACGCAGCCGGGTGCCCGAAAGCAGGTGCGAGTAAAGATCGAAAATAGCCGCCGTTTCt              >  1:271724/1‑90 (MQ=255)             aCCTCGGCAAACAATTCGCGACGCAGCCGGGTGTCCGAAAGCAGGTGCGAGTAAAGATCGAAAATAGCCGCCGTTTCTTTTTGTGCACcg  >  2:399429/1‑90 (MQ=255)                                                                                          |             GAGCCTTTATCAACCTCGGCAAACAATTCGCGACGCAGCCGGGTGTCCGAAAGCAGGTGCGAGTAAAGATCGAAAATAGCCGCCGTTTCTTTTTGTGCACCG  >  NZ_CP009273/2960997‑2961098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑