Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1312979	1313019	41	3 [1]	[0] 2	trpCF	bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF

ATACAGCTGTTCTTCATTACCATGCAGTTGCACTGCCGCCAG  >  NZ_CP009273/1313020‑1313061 |                                          ataCAGCTGTTCTTCATTACCATGCAGTTGCACTGCCGCCAg  >  1:73701/1‑42 (MQ=255) ataCAGCTGTTCTTCATTACCATGCAGTTGCACTGCCGCCAg  <  2:73701/42‑1 (MQ=255) |                                          ATACAGCTGTTCTTCATTACCATGCAGTTGCACTGCCGCCAG  >  NZ_CP009273/1313020‑1313061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑