Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2440483	2440541	59	2 [1]	[1] 2	aroC	chorismate synthase

CGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGTTTCGCGGGCGGAAGAACGTCCACCGCCGCGATAATCGCGCAGACCGTATTTTTGTTCGTAGGTGTAATC  >  NZ_CP009273/2440517‑2440631                          |                                                                                          cGAGATATTTTTTGGCAATAGCCCCTGCCGCCACGCGCATGGCGGTTTCGCGGGCGGAAGAACGTCCACCGCCGCGATAATCGCGCAGAc                           <  2:155024/90‑1 (MQ=255)                          tGCCGCCACGCGCATGGCGGTTTCGCGGGCGGAAGAACGTCCACCCCCGCGATAATCGCGCAGACCGTATTTTTGTTCGTAGGGGTAATc  >  2:359410/1‑90 (MQ=255)                          |                                                                                          CGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGTTTCGCGGGCGGAAGAACGTCCACCGCCGCGATAATCGCGCAGACCGTATTTTTGTTCGTAGGTGTAATC  >  NZ_CP009273/2440517‑2440631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑