| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,818,674 | A→C | L174R (CTG→CGG) | ves ← | environmental stress‑induced protein Ves |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,818,674 | 0 | A | C | 100.0% | 14.9 / NA | 6 | L174R (CTG→CGG) | ves | environmental stress‑induced protein Ves |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (2/4); total (2/4) | |||||||||||
TGCTTTCCGGTAACTATGAAATTACTGAACTTGATCCGGCGAATGACCAGCGAGCCAGTTGATTTCACTGAACAACAGTTTACCTTGCGGTTGTAAAAGCCGCAGGGTGTGCCTGCCATCGAACCAGCACGCGCCC > NZ_CP009273/1818598‑1818733 | tgctTTCCGGTAACTATGAAATTACTGAACTTGATCCGGCGAATGACCAGCGAGCCAGTTGATTTCACTGAACAACCGTTTACCTTGCgg < 1:301465/90‑1 (MQ=255) tGAAATTACTGAACTTGATCCGGCGAATGACCAGCGAGCCAGTTGATTTCACTGAACAACCGTTTACCTTGCGGTTGTAAAAGCCGCAgg < 2:221741/90‑1 (MQ=255) aTCCGGCGAATGACCAGCGAGCCAGTTGATTTCACTGAACAACCGTTTACCTTGCGGTTGTAAAAGCCGCAGGGTGTGCCTGCCATCGaa > 2:33529/1‑90 (MQ=255) aTCCGGCGAATGACCAGCGAGCCAGTTGATTTCACTGAACAACCGTTTACCTTGCGGTTGTAAAAGCCGCAGGGTGTGCCTGCCATCGaa > 2:394627/1‑90 (MQ=255) gACCAGCGAGCCAGTTGATTTCACTGAACAACCGTTTACCTTGCGGTTGTAAAAGCCGCAGGGTGTGCCTGCCATCGAACCAGCACgcgc < 1:106563/90‑1 (MQ=255) ccAGCGAGCCAGTTGATTTCACTGAACAACCGTTTACCTTGCGGTTGTAAAAGCCGCAGGGTGTGCCTGCCATCGAACCAGCACGCGccc < 2:317174/90‑1 (MQ=255) | TGCTTTCCGGTAACTATGAAATTACTGAACTTGATCCGGCGAATGACCAGCGAGCCAGTTGATTTCACTGAACAACAGTTTACCTTGCGGTTGTAAAAGCCGCAGGGTGTGCCTGCCATCGAACCAGCACGCGCCC > NZ_CP009273/1818598‑1818733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |