| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,574,956 | (T)5→4 | coding (92/1158 nt) | ydeM ← | anaerobic sulfatase maturase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,574,952 | 0 | T | . | 100.0% | 37.6 / NA | 10 | coding (96/1158 nt) | ydeM | anaerobic sulfatase maturase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (5/5); total (5/5) | |||||||||||
ACCGCCTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCATTTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAGGGCTTGGCTG > NZ_CP009273/1574865‑1575037 | aCCGCCTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCAttt > 2:288878/1‑90 (MQ=255) ccTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCAttttcat < 1:84247/90‑4 (MQ=255) gATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTc > 2:1000474/1‑90 (MQ=255) aTTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCa < 1:305368/90‑1 (MQ=255) aCGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTaaaa < 2:362811/90‑1 (MQ=255) tatatTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATc < 2:747423/90‑1 (MQ=255) ttGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACAt < 1:83640/90‑1 (MQ=255) gTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACAttt > 1:602208/1‑90 (MQ=255) gaACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTa > 2:361317/1‑90 (MQ=255) gaACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTa > 2:621047/1‑90 (MQ=255) ctctTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACAt > 2:980130/1‑90 (MQ=255) gCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAg < 2:892381/90‑1 (MQ=255) atcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAGGGCTTGGCTg > 1:878073/1‑90 (MQ=255) | ACCGCCTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCATTTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAGGGCTTGGCTG > NZ_CP009273/1574865‑1575037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |