| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 281 (4.360) | 56/166 | 0.0 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
Only 100 of 238 total aligned reads displayed.
ACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360016‑360193 | gCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc > 1:457397/1‑90 (MQ=255) gCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc > 1:1144779/1‑90 (MQ=255) gCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc < 1:1321395/90‑1 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 2:1872775/1‑90 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:593292/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgac < 2:803941/90‑3 (MQ=255) gCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 1:1019831/1‑90 (MQ=255) tACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATgg > 1:1878105/1‑90 (MQ=255) cATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgg < 2:1363899/90‑1 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 2:481249/90‑1 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg > 1:1093384/1‑90 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 1:301544/90‑1 (MQ=255) ccAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggc‑g > 1:159077/1‑90 (MQ=255) ccAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCAGGCa < 2:1778095/76‑1 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 1:1275230/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 1:598607/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 2:1881883/1‑87 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGTGC‑GTcc < 2:555896/90‑1 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc < 2:501560/90‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTg < 1:49204/90‑1 (MQ=255) ccccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCTGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGcc < 2:1800134/88‑1 (MQ=255) accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCTcccc > 2:1523088/1‑90 (MQ=255) accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCTcccc > 2:1847744/1‑90 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCa < 1:316408/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCa < 1:1685359/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCAc < 2:737537/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCAc < 2:157273/90‑1 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCTGccccccccccc > 2:1711062/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGccccccccccc > 2:1465103/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGccccccccccc > 2:1702806/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGccccccccccc > 2:1110447/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCTGccccccccccc > 1:746995/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGccccccccccc > 1:778959/1‑89 (MQ=39) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTcc < 2:143451/90‑1 (MQ=255) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGCcccccccccccc > 1:546794/1‑90 (MQ=38) cAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc > 2:239679/1‑74 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCgg < 2:808189/90‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCGTCCCGCCCCCCCCCcgg > 2:1734960/1‑90 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGCccccccccccccccg > 1:903859/1‑87 (MQ=38) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGA‑GGCCGGCccccccccccccccc > 2:1203836/1‑87 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 1:358560/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 1:344727/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 1:1390410/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 1:729035/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 2:754573/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGCCCCCCCCCCCCCCGGCCGt > 1:250287/1‑90 (MQ=37) atCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 1:373716/89‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgg < 2:1188544/61‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCTGCCCCCCCCCCCCCCGGCCggt > 1:939222/1‑88 (MQ=37) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCTGCCCCCCCCCCCCCCGGCCggt > 1:1120179/1‑88 (MQ=37) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCCCCCCCCCCCCCCCCGGCCggt > 1:1810731/1‑88 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCAGCCACCCTCCGGGCCGtt < 2:1452773/90‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCTCCCCCCCCCCCCCCccgccggt > 2:602173/1‑88 (MQ=37) atAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGc < 1:1734960/90‑1 (MQ=255) tAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCT‑CGGGCCGTTGCTTCGCaa < 2:52444/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:586090/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:1484011/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:1652723/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:1144779/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:406886/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:1611674/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:1831557/90‑1 (MQ=255) aaGCTGTCAAACATGAAAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:940678/90‑1 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GTCCCGCCCCCCCCCCCCCCGGCCCCTGCTTTGCCAccgtc > 1:1709801/1‑86 (MQ=19) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc > 1:282862/1‑53 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc < 2:282862/53‑1 (MQ=255) tCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCa < 1:1046472/90‑1 (MQ=255) aTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCTCCCCCCCCCCCCCCGGGCCG‑TGCTTCCCCACCCTCAAAAccc > 1:1633819/1‑89 (MQ=16) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGCCCCCCCCCCCCCCGCCCCCTGCTTCTCTACGGTTCAATCCGc > 2:1677036/1‑90 (MQ=16) tGAGAATTCCGATCCCCAATCCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGc < 2:1633819/90‑1 (MQ=255) agaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCTGCCCCCCCCCCCCCCGGGCGTTGGTTTGCAACGTTTAAAAcccccc > 1:811178/1‑86 (MQ=12) gATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGcc < 2:642439/39‑1 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGcc > 1:642439/1‑39 (MQ=255) caTCCCAAATTCCTGCCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGa < 1:1298340/89‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:939222/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:457397/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:125818/90‑1 (MQ=255) gccccAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 1:281533/89‑1 (MQ=255) ccAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 1:1302407/90‑1 (MQ=38) ccAATCCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 1:1583122/90‑1 (MQ=18) aaTTCCTGGCAGTTTATGGGGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1228002/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1281001/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1181191/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:816328/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:875591/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1465103/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1523088/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1781952/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1564755/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:336502/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1410171/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:21533/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:427975/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:8678/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:983181/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1005049/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1054280/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1690820/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1329950/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GGCCCGCCCCCCCCCCCCCCGGCCGGTGCTTTGCAACGTTCAAAACCCCCCCCCGCGGGttttttc > 1:1422287/1‑86 (MQ=2) | ACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360016‑360193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |