| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 155 (2.190) | 48/166 | 0.1 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
Only 100 of 142 total aligned reads displayed.
CACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360015‑360193 | cACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCa < 2:1076506/90‑1 (MQ=255) aCCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa > 1:224335/1‑90 (MQ=255) aCCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa < 1:1691582/90‑1 (MQ=255) aCCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa > 2:648843/1‑90 (MQ=255) cGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 2:2060052/1‑90 (MQ=255) cGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 2:390983/1‑90 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:1071756/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 2:1233404/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 1:490194/90‑1 (MQ=255) gCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt > 2:620202/1‑90 (MQ=255) ttACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg > 2:88391/1‑90 (MQ=255) ttACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg < 1:1387715/90‑1 (MQ=255) aCCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggc < 2:1796031/90‑1 (MQ=255) aCCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggc < 2:328621/90‑1 (MQ=255) cATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgg < 1:884242/90‑1 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 2:1301586/90‑1 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 1:381619/90‑1 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 2:1613548/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑Gt > 2:1447381/1‑90 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑Gt < 2:1976333/90‑1 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc < 1:186593/90‑1 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc < 1:441810/90‑1 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTcc < 2:2053645/90‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTg < 2:837320/90‑1 (MQ=255) accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑Ggcccgccc > 2:1642368/1‑90 (MQ=255) accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑Ggcccgccc > 1:479573/1‑90 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCa < 1:1229403/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCa < 1:648843/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCa < 2:1197109/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCa < 1:1300365/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCAc < 1:1097823/90‑1 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCTGccccccccccc > 2:629028/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCTccccccccccc > 2:198082/1‑89 (MQ=255) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTcc < 2:1200537/90‑1 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTGCTcccccccccccccccg > 2:1602744/1‑88 (MQ=38) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCgg < 1:1534856/90‑1 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCgg < 1:1750722/90‑1 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCgg < 2:170555/90‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc > 2:1803994/1‑54 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GTCCTGCCCCCCCCCCCCCcgg > 2:345332/1‑90 (MQ=38) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGCccccccccccccccg > 1:709575/1‑87 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGCCCCCCCCCCCCCcgg > 2:1290006/1‑90 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GCCCTGCccccccccccccccg > 2:1341130/1‑87 (MQ=38) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCAATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGCCCCCCCCCCCCCcgg > 1:71782/1‑90 (MQ=255) aGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGcc < 1:145593/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 1:1918614/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGt < 2:256194/90‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 2:1285394/62‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg > 1:1285394/1‑62 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GTCCTg > 2:1800918/1‑69 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCCGCCCCCCCCCCCCCCGGcccct > 2:745035/1‑87 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTg < 1:1800918/69‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGtt < 1:280348/90‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCCTCCCGCCCCCCCCCccgccgct > 1:351850/1‑88 (MQ=37) cGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGCCCCCCCCCCCCCCGGCCGCTGc > 2:1907732/1‑90 (MQ=37) atAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGc < 2:1253655/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:1333616/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:772589/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:345332/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:1662466/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:580430/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:629028/90‑1 (MQ=255) gCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCCCCCCCCCCCCCCCCGGCCGGTGCTTCCCAAcc > 2:191154/1‑89 (MQ=21) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgg > 1:195803/1‑47 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCCGCCCCCCCCCCCCCCGGCCGGTGCTTTGCAACCTTc > 2:502178/1‑90 (MQ=21) agaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGG‑GGCCTGCCCCCCCCCCCCCCGGCCGTTGCTTTGCAACGATTAAAAcccccc > 2:1957886/1‑86 (MQ=12) agaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCTGCCCCCCCCCCCCCCGGCCGTTGCTTTGCCACGTTCAAAAcccccc > 2:379475/1‑86 (MQ=17) aTTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCCCCCCCCCCCCCCCCGGGCCGTT‑CTTTGCAACATTCAAAAccccccccc > 2:1617949/1‑89 (MQ=12) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggc < 1:1802637/90‑1 (MQ=255) tCCGATCCCAAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggc < 1:996124/90‑1 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCCCCCCCCCCCCGGCCGTTGCTTCGCAAAGTTTAAATCCGCTCCccgcggg > 2:447057/1‑89 (MQ=14) gATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GGCCCGCCCCCCCCCCCCCCGGCCCCTGCTTCCCAACCTTCAAAACCCCCCCccgcggg > 2:1862569/1‑89 (MQ=9) aTCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAt < 1:1634109/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:1214977/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:1951556/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:2011505/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt < 2:1004449/90‑1 (MQ=255) attaaTTCCTGGCAGTTTATGGCGGGG‑GTCCTGCCCCCCCCCCCCCCGGCCGGTGCTTTGCAAAGTTCAAAACCCCCCCCCGCGGGtttt > 2:431354/4‑89 (MQ=2) attaaTTCCTGGCAGTTTATGGCGGGC‑GGCCTGCCCCCCCCCCCCCCGGCCGTTGCTTTTCAACGTTTAAATCCGCCCCCCGCGGGtttt > 2:59520/4‑89 (MQ=2) ccAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGt < 1:2024825/90‑1 (MQ=255) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1077175/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:770796/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:833724/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1357794/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1515642/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1617949/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:71782/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:706221/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1038967/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1677990/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1122608/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:277585/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1863559/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:498237/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:580335/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:508071/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:398234/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:507190/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:44397/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCACGGTGGATTTGTcc < 2:1558558/90‑1 (MQ=255) | CACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGC‑GTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360015‑360193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |