| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 183 (4.360) | 51/166 | 0.0 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
Only 100 of 125 total aligned reads displayed.
ACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360016‑360193 | aCCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa > 1:459133/1‑90 (MQ=255) cGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 1:1183896/1‑90 (MQ=255) cTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTcc > 1:1130626/1‑90 (MQ=255) cTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTcc > 2:605125/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 1:20818/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 2:110179/1‑90 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:1184623/90‑1 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:1183896/90‑1 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:837140/90‑1 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 2:710618/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 1:887366/90‑1 (MQ=255) gCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 2:362278/1‑90 (MQ=255) ttACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg < 2:528736/90‑1 (MQ=255) ttACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg > 2:1180803/1‑90 (MQ=255) ttACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg > 1:1020898/1‑90 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg > 2:137414/1‑90 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 1:378280/90‑1 (MQ=255) tCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggg > 1:687562/1‑89 (MQ=255) ccAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcg > 2:270670/1‑90 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 1:41554/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcgg > 1:843954/1‑89 (MQ=255) aGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcggg > 1:1064350/1‑88 (MQ=255) gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc < 1:1218848/90‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg < 2:183068/68‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 1:183068/1‑68 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑Tg < 1:605125/90‑1 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGcccc > 1:624304/1‑88 (MQ=255) accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGccc < 2:843954/90‑1 (MQ=255) caTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑TGccccc > 1:313573/1‑88 (MQ=255) aTCCAGGGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc > 2:939368/1‑64 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCa < 2:396945/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCa < 1:820348/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCAc < 1:342025/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCAc < 2:123367/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCAc < 1:93254/90‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCAc < 2:806044/90‑1 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑TGCCCGccccccc > 2:287791/1‑89 (MQ=39) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑Tg > 1:980175/1‑79 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGGC‑TAccccccccccc > 2:583738/1‑89 (MQ=255) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCC‑TTccccccccccc > 1:91114/1‑89 (MQ=39) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTcc < 1:610019/90‑1 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCgg < 1:815518/90‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 1:1115751/53‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg > 2:1115751/1‑53 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑CGCccccccccccccccg > 1:681113/1‑87 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCCCCACCCCCCcgg > 2:88391/1‑90 (MQ=38) gCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑TTCCCCCCCCCCCCCCGGCCg > 2:146115/1‑90 (MQ=37) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGt < 2:1155723/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGt < 1:150039/90‑1 (MQ=255) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGt < 1:457665/90‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCTTCCCCCCCCCCCCCCGGGcctt > 2:638114/1‑88 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑TGCCCCCCCCCCCCCCGGccccg > 2:16143/1‑87 (MQ=37) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑CGCCCCCCCCCCCCCCGGcccgt > 2:150039/1‑87 (MQ=255) tAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCC‑TGCCCCCCCCCCCCCCGGCCGGTGCTTCCCa > 2:717764/1‑90 (MQ=25) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:336913/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:287791/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:360604/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 2:375736/90‑1 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg < 2:608750/48‑1 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg > 1:608750/1‑48 (MQ=255) cAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑CCCCCCCCCCCCCCCCGGCCCGTGCTTCGCAAA‑GTTCaa > 2:779067/1‑90 (MQ=21) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCC‑TGCCCCCCCCCCCCCCCGCCGGTGGTTCTCCAC‑GTTCCAATcccc > 1:1204550/1‑88 (MQ=16) tGAGAATTCCGATCCCCAATTCCTCGCAGTTTATGGCGGGCGGCC‑TGCCCCCCCCCCCCCCGGCCGGTGCTTCGCAAC‑GTTTAAATcccc > 2:389920/1‑88 (MQ=18) gagaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑CGCCCCCCCCCCCCCCCGCCGTTGCTTCCCAAC‑GTTCCAAACCCCt > 1:110042/1‑90 (MQ=16) agaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑CGCCCCCCCCCCCCCCGGCCCGTGCTTCGCCACAGTTAAAATccccc > 1:500449/1‑87 (MQ=12) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCcggc < 1:924426/90‑1 (MQ=255) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCcggc < 2:498404/90‑1 (MQ=255) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCcggc < 1:449166/90‑1 (MQ=255) ccGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCcggcg < 2:782634/90‑1 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑TGCCCCCCCCCCCCCCGGCCGCTGGTTTGCCAC‑ATTTAAAACCCCCCCccgcggg > 2:837219/1‑89 (MQ=9) gATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCC‑TGCCCCCCCCCCCCCCCGCCGTTGCTTCGCCAA‑GTTCAAATCCCCCCCccgcggg > 1:1117029/1‑89 (MQ=9) gATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCCCCCCCCCCCCGGCCCCTGCTTTCCAAA‑GTTTAAAACCCCCCCccgcggg > 1:212859/1‑89 (MQ=9) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:870348/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:921858/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:843679/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:1032615/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:1034613/90‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:500449/90‑1 (MQ=255) ccAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGt < 2:313573/90‑1 (MQ=38) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:268604/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:710608/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:812487/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1070432/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:216465/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:544818/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:146115/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:470204/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:26135/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:200435/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:191834/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:501453/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:276664/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:112433/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:110042/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:951680/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:767966/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:751067/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:69407/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:498484/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:515273/90‑1 (MQ=35) | ACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360016‑360193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |