Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1525929	1525956	28	2 [1]	[1] 3	BW25113_RS07655	ISAs1 family transposase

CACTTTTTGTACTAAACAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTAAAGCTGTTTTTTATTGCTTACACATGAT  >  NZ_CP009273/1525951‑1526040       |                                                                                    cccTTTTTGTACTAAACAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTAAAGCTGTTTTTTATTGCTTACACATGAt  <  2:334020/88‑1 (MQ=255)       ttGTACTAAACAATTCGCATTTTATGTTTAAAAATTGAGATATTCCttat                                    <  1:48263/50‑1 (MQ=40)       ttGTACTAAACAATTCGCATTTTATGTTTAAAAATTGAGATATTCCttat                                    >  2:48263/1‑50 (MQ=40)       |                                                                                    CACTTTTTGTACTAAACAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTAAAGCTGTTTTTTATTGCTTACACATGAT  >  NZ_CP009273/1525951‑1526040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑