Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1524311	1524324	14	4 [1]	[1] 2	BW25113_RS07645/BW25113_RS26145	RHS repeat protein/hypothetical protein

ACCCTTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGAT  >  NZ_CP009273/1524221‑1524315                                                                                          |      aCCCTTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt       <  1:686223/90‑1 (MQ=255)      ttGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGat  >  2:110114/1‑90 (MQ=255)                                                   tGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt       <  1:733924/40‑1 (MQ=255)                                                   tGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt       >  2:733924/1‑40 (MQ=255)                                                                                          |      ACCCTTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGAT  >  NZ_CP009273/1524221‑1524315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑