Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1199849	1199873	25	2 [0]	[1] 2	[BW25113_RS26105]–[BW25113_RS05965]	[BW25113_RS26105],[BW25113_RS05965]

GCTGGAAGCAGAAGGCTGGTTAACGCGTAAGGCGC  >  NZ_CP009273/1199814‑1199848                                   | gCTGGAAGCAGAAGGCTGGTTAACGCGTAAGgcgc  >  1:116180/1‑35 (MQ=255) gCTGGAAGCAGAAGGCTGGTTAACGCGTAAGgcgc  <  2:116180/35‑1 (MQ=255)                                   | GCTGGAAGCAGAAGGCTGGTTAACGCGTAAGGCGC  >  NZ_CP009273/1199814‑1199848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑